RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 SLC7A8Q9UHI5 535 aa5.72□□□□□ -1.49
SDC4P-201ENST00000453285 ATP6V1HQ9UI12 483 aa5.72□□□□□ -1.49
SDC4P-201ENST00000453285 LEF1Q9UJU2 399 aaPredicted RBP5.72□□□□□ -1.49
SDC4P-201ENST00000453285 ADAM29Q9UKF5 820 aa5.72□□□□□ -1.49
SDC4P-201ENST00000453285 CROTQ9UKG9 612 aa5.72□□□□□ -1.49
SDC4P-201ENST00000453285 PADI4Q9UM07 663 aa5.72□□□□□ -1.49
SDC4P-201ENST00000453285 PRPF19Q9UMS4 504 aaKnown RBP5.72□□□□□ -1.49
SDC4P-201ENST00000453285 ERVK-11Q9UQG0 969 aa5.72□□□□□ -1.49
SDC4P-201ENST00000453285 MAN2B2Q9Y2E5 1009 aa5.72□□□□□ -1.49
SDC4P-201ENST00000453285 KNTC1P50748 2209 aa5.72□□□□□ -1.49
SDC4P-201ENST00000453285 OTOGLQ3ZCN5 2332 aa5.71□□□□□ -1.49
SDC4P-201ENST00000453285 TRBV5-3A0A0A0MS03 114 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 A0A0A6YYD5 115 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 IGHV5-51A0A0C4DH38 117 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 A0A0G2JN53 185 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 GNG14A0A1W2PPG7 69 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 SLC9B1P1A6NJY1 282 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 RHPN2P1A8MT19 583 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 A8MUI8 341 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 H0YGG7 62 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ANGPT2O15123 496 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 SCAMP2O15127 329 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 CASC3O15234 703 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 CAPN5O15484 640 aaPredicted RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 YKT6O15498 198 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 AKAP10O43572 662 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 SIGLEC6O43699 453 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 KIF1CO43896 1103 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 TBX19O60806 448 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 SCELO95171 688 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 B3GALT4O96024 378 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 NPPAP01160 153 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 C9P02748 559 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 SERPIND1P05546 499 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 CTSBP07858 339 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 FURINP09958 794 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 LAMP1P11279 417 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 PNLIPP16233 465 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 CDH3P22223 829 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 SLC6A2P23975 617 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 CD1CP29017 333 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 PTPN6P29350 595 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 S100A3P33764 101 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 GPR3P46089 330 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 HNRNPFP52597 415 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 MTTPP55157 894 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 GFERP55789 205 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 TAS2R50P59544 299 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ARF3P61204 181 aaPredicted RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 TRA2BP62995 288 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 MC1RQ01726 317 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 SRSF11Q05519 484 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ZNF763Q0D2J5 394 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 C2orf80Q0P641 193 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 SQSTM1Q13501 440 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 PWP1Q13610 501 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 NFYCQ13952 458 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 CEACAM7Q14002 265 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 CAPRIN1Q14444 709 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 MPEG1Q2M385 716 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 TRMT5Q32P41 509 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 TIGD2Q4W5G0 525 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 TRIM61Q5EBN2 209 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 PLA2G2CQ5R387 149 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 CCNYL2Q5T2Q4 361 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 NKAIN2Q5VXU1 208 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 OR4F3Q6IEY1 312 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ANKRD26P1Q6NSI1 321 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 NANOGP8Q6NSW7 305 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ARMC6Q6NXE6 501 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ZCCHC8Q6NZY4 707 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 KLHL35Q6PF15 583 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 DBX2Q6ZNG2 339 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 MSANTD1Q6ZTZ1 278 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 DGLUCYQ7Z3D6 616 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ASPGQ86U10 573 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 NUDT13Q86X67 352 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 MSRB3Q8IXL7 192 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 SLC15A3Q8IY34 581 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 KIAA2013Q8IYS2 634 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 MMP21Q8N119 569 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 FBXW8Q8N3Y1 598 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ZCCHC7Q8N3Z6 543 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ARHGEF39Q8N4T4 335 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 TBC1D19Q8N5T2 526 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 C19orf47Q8N9M1 422 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 KCT2Q8NC54 265 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 OR2L5Q8NG80 312 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 OR8J2Q8NGG1 315 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 UTP15Q8TED0 518 aaKnown RBP5.71□□□□□ -1.5
SDC4P-201ENST00000453285 WDR60Q8WVS4 1066 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 UCN3Q969E3 161 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 TMEM125Q96AQ2 219 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 MCUR1Q96AQ8 359 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 MIEF2Q96C03 454 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ZNF285Q96NJ3 590 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 OR52E6Q96RD3 313 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 CDRT15Q96T59 188 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 ZBTB18Q99592 522 aa5.71□□□□□ -1.5
SDC4P-201ENST00000453285 HOPXQ9BPY8 73 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms