RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CAV1Q03135 178 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 GTF3C1Q12789 2109 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 C18orf21Q32NC0 220 aaPredicted RBP12.12□□□□□ -0.47
CHD3-206ENST00000452447 H3F3CQ6NXT2 135 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 CYS1Q717R9 158 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 MAMDC2Q7Z304 686 aaPredicted RBP12.12□□□□□ -0.47
CHD3-206ENST00000452447 GPSM1Q86YR5 675 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 BEST3Q8N1M1 668 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 TCAIMQ8N3R3 496 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 SPATA6LQ8N4H0 392 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 SLC5A8Q8N695 610 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 CCT6BQ92526 530 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 NR4A3Q92570 626 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 FAR2Q96K12 515 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 RBBP8Q99708 897 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 CAPS2Q9BXY5 557 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 KLHL31Q9H511 634 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 GRHL1Q9NZI5 618 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 CTAGE15A4D2H0 777 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 DNAJB6O75190 326 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 RNH1P13489 461 aaKnown RBP12.11□□□□□ -0.47
CHD3-206ENST00000452447 SPRP35270 261 aaPredicted RBP12.11□□□□□ -0.47
CHD3-206ENST00000452447 SLC6A12P48065 614 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 ETF1P62495 437 aaKnown RBP12.11□□□□□ -0.47
CHD3-206ENST00000452447 HYAL2Q12891 473 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 SLBPQ14493 270 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHD3-206ENST00000452447 ZNF766Q5HY98 468 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 TOR1AIP1Q5JTV8 583 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 TMIGD1Q6UXZ0 262 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 SLCO4C1Q6ZQN7 724 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 QSOX2Q6ZRP7 698 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 CTAGE6Q86UF2 777 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 CCDC25Q86WR0 208 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 CRLF3Q8IUI8 442 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 CYP4X1Q8N118 509 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 KRT78Q8N1N4 520 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 DNAJB8Q8NHS0 232 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 CREB3L4Q8TEY5 395 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 GPR22Q99680 433 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 UTP23Q9BRU9 249 aaKnown RBP12.11□□□□□ -0.47
CHD3-206ENST00000452447 RHBGQ9H310 441 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 CREBBPQ92793 2442 aa12.11□□□□□ -0.47
CHD3-206ENST00000452447 CELSR2Q9HCU4 2923 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 A0A088AWK7 358 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 ANKDD1BA6NHY2 528 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 FAM159BA6NKW6 160 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 CLGNO14967 610 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 STK16O75716 305 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 S100BP04271 92 aaPredicted RBP12.1□□□□□ -0.47
CHD3-206ENST00000452447 SMIM10L1P0DMW3 83 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 CD1DP15813 335 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 ZNF10P21506 573 aaPredicted RBP12.1□□□□□ -0.47
CHD3-206ENST00000452447 GSTM2P28161 218 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 HPDP32754 393 aaPredicted RBP12.1□□□□□ -0.47
CHD3-206ENST00000452447 SLC26A5P58743 744 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 RAB10P61026 200 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 BTN3A2P78410 334 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 BTG2P78543 158 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 GLIPR1L2Q4G1C9 344 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 CDKL4Q5MAI5 379 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 GRTP1Q5TC63 336 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 ZNF324BQ6AW86 544 aaPredicted RBP12.1□□□□□ -0.47
CHD3-206ENST00000452447 SULT1C3Q6IMI6 304 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 GFRALQ6UXV0 394 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 SYT10Q6XYQ8 523 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHD3-206ENST00000452447 KLHDC8AQ8IYD2 350 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 PPM1NQ8N819 430 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 SMIM10Q96HG1 83 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 SEC16BQ96JE7 1060 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 PHACTR1Q9C0D0 580 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 PRM3Q9NNZ6 103 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 DNAJC11Q9NVH1 559 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 ANKRD10Q9NXR5 420 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 GPRC5BQ9NZH0 403 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 CD274Q9NZQ7 290 aa12.1□□□□□ -0.47
CHD3-206ENST00000452447 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHD3-206ENST00000452447 A0A1B0GUH1 482 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 TAPBPO15533 448 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 ERI3O43414 337 aaKnown RBP12.09□□□□□ -0.47
CHD3-206ENST00000452447 WISP3O95389 354 aaPredicted RBP12.09□□□□□ -0.47
CHD3-206ENST00000452447 CLDN1O95832 211 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 MAOAP21397 527 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 GGT5P36269 586 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 HSPA7P48741 367 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 GPX6P59796 221 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 OC90Q02509 493 aaPredicted RBP12.09□□□□□ -0.47
CHD3-206ENST00000452447 TUBA3CQ13748 450 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 OR1C1Q15619 314 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 KBTBD12Q3ZCT8 623 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 FBXO48Q5FWF7 155 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 TUBA3EQ6PEY2 450 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 RAPH1Q70E73 1250 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 C17orf53Q8N3J3 647 aaPredicted RBP12.09□□□□□ -0.47
CHD3-206ENST00000452447 HORMAD2Q8N7B1 307 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 SNX31Q8N9S9 440 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 FBXO25Q8TCJ0 367 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 GAL3ST3Q96A11 431 aa12.09□□□□□ -0.47
CHD3-206ENST00000452447 PITHD1Q9GZP4 211 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms