RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 RMI1Q9H9A7 625 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 SLC8A2Q9UPR5 921 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 AP4B1Q9Y6B7 739 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 KANSL1LA0AUZ9 987 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 RTCAO00442 366 aaKnown RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 AKAP10O43572 662 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 LZTS3O60299 673 aaPredicted RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 GIMD1P0DJR0 217 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 MAT2AP31153 395 aaKnown RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 SHMT2P34897 504 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 PLIN5Q00G26 463 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 PRDX1Q06830 199 aaKnown RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 FZD2Q14332 565 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 SYTL3Q4VX76 610 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 CAPN13Q6MZZ7 669 aaPredicted RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 MED27Q6P2C8 311 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 OR10Q1Q8NGQ4 319 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 ADAMTS16Q8TE57 1224 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 PATE1Q8WXA2 126 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 SGCDQ92629 289 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 STMN2Q93045 179 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 MAL2Q969L2 176 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 MAGEB10Q96LZ2 347 aaPredicted RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 NECTIN4Q96NY8 510 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 FCRL4Q96PJ5 515 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 MACROD1Q9BQ69 325 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 ELOVL6Q9H5J4 265 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 SOX17Q9H6I2 414 aaPredicted RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 KCMF1Q9P0J7 381 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 DOLKQ9UPQ8 538 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 RUVBL1Q9Y265 456 aaKnown RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 SCAMP1O15126 338 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 VILLO15195 856 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 PRAMEF10O60809 474 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 CD6P30203 668 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 SLC19A1P41440 591 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 ZNF763Q0D2J5 394 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 RGNQ15493 299 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 MMEL1Q495T6 779 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 KHDRBS2Q5VWX1 349 aaKnown RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 SAXO2Q658L1 398 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 MICU2Q8IYU8 434 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 SIMC1Q8NDZ2 872 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 OR4D11Q8NGI4 311 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 FGF11Q92914 225 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 MS4A6EQ96DS6 147 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 DPY30Q9C005 99 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 BHLHE41Q9C0J9 482 aaPredicted RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 CCDC177Q9NQR7 707 aaPredicted RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 PAK1IP1Q9NWT1 392 aaPredicted RBP6.28□□□□□ -1.4
USP46-202ENST00000451218 GID8Q9NWU2 228 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 DLGAP2Q9P1A6 1054 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 ZNF232Q9UNY5 417 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 PCDHB11Q9Y5F2 797 aa6.28□□□□□ -1.4
USP46-202ENST00000451218 C15orf38-AP3S2A0A0A6YYH1 394 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 FFAR1O14842 300 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 DPM1O60762 260 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 CREG1O75629 220 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 MYF6P23409 242 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 CCR3P51677 355 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 PLOD1Q02809 727 aaPredicted RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 LAPTM5Q13571 262 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 SUZ12Q15022 739 aaKnown RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 MAPKAPK3Q16644 382 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 NRF1Q16656 503 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 CTU2Q2VPK5 515 aaKnown RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 DEPDC1Q5TB30 811 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 AP1ARQ63HQ0 302 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 FBXO42Q6P3S6 717 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 DNAJC14Q6Y2X3 702 aaPredicted RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 CHST15Q7LFX5 561 aaPredicted RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 ARPINQ7Z6K5 226 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 PROSER1Q86XN7 944 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 OR13H1Q8NG92 308 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 CXorf40BQ96DE9 158 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 EFCAB11Q9BUY7 163 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 ZCCHC2Q9C0B9 1178 aaKnown RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 FAM120CQ9NX05 1096 aaKnown RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 SCML1Q9UN30 329 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 EIF3LQ9Y262 564 aaKnown RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 DTNAQ9Y4J8 743 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 OR2A25A4D2G3 310 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 HYAL3O43820 417 aaPredicted RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 SH3BGRLO75368 114 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 BAG2O95816 211 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 CD247P20963 164 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 KELP23276 732 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 TRPC1P48995 793 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 MLC1Q15049 377 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 PDK3Q15120 406 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 HABP4Q5JVS0 413 aaKnown RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 ZNF770Q6IQ21 691 aaPredicted RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 PIWIL3Q7Z3Z3 882 aaKnown RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 CYP4Z1Q86W10 505 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 SPATA24Q86W54 205 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 NAGSQ8N159 534 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 FAM160A2Q8N612 972 aaPredicted RBP6.27□□□□□ -1.41
USP46-202ENST00000451218 ZSCAN1Q8NBB4 408 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 OR14C36Q8NHC7 312 aa6.27□□□□□ -1.41
USP46-202ENST00000451218 OR2A5Q96R48 311 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms