RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 LIN54Q6MZP7 749 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MZT2BQ6NZ67 158 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CASC4Q6P4E1 433 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 C11orf88Q6PI97 169 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CNSTQ6PJW8 725 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 C16orf89Q6UX73 402 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZYG11AQ6WRX3 759 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TPGS1Q6ZTW0 290 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RNF44Q7L0R7 432 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TRILQ7L0X0 811 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 HSD17B13Q7Z5P4 300 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PLEKHH3Q7Z736 793 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 B3GNT8Q7Z7M8 397 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MOGAT3Q86VF5 341 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 COMMD7Q86VX2 200 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CATSPER3Q86XQ3 398 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CDKL3Q8IVW4 592 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ENTHD1Q8IYW4 607 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MCOLN2Q8IZK6 566 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 DEFB107AQ8IZN7 70 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 GHDCQ8N2G8 530 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 NANOGP1Q8N7R0 232 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF781Q8N8C0 355 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 GDPD1Q8N9F7 314 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 AVL9Q8NBF6 648 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 KIAA0895Q8NCT3 520 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PAPD5Q8NDF8 572 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 FBXO36Q8NEA4 188 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TRPV1Q8NER1 839 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 OR6M1Q8NGM8 313 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF384Q8TF68 577 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 STYXQ8WUJ0 223 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SFT2D1Q8WV19 159 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ROBO4Q8WZ75 1007 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SHC3Q92529 594 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 HGDQ93099 445 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 EID2BQ96D98 161 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RNF31Q96EP0 1072 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 LRRC46Q96FV0 321 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZBED3Q96IU2 234 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 KIRREL1Q96J84 757 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 VCPIP1Q96JH7 1222 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 HYLS1Q96M11 299 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ZNF778Q96MU6 729 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RDH12Q96NR8 316 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CDCA3Q99618 268 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TCEAL7Q9BRU2 100 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MTG1Q9BT17 334 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TBCDQ9BTW9 1192 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 C11orf84Q9BUA3 381 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 LSM14BQ9BX40 385 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ALOXE3Q9BYJ1 711 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 KATNBL1Q9H079 304 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 C11orf54Q9H0W9 315 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 OR51V1Q9H2C8 321 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SEMA6AQ9H2E6 1030 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MIXL1Q9H2W2 232 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TTYH1Q9H313 450 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PIGUQ9H490 435 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 OSGEPL1Q9H4B0 414 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SAV1Q9H4B6 383 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 GORASP2Q9H8Y8 452 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 COPS7BQ9H9Q2 264 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RNF122Q9H9V4 155 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 CYP3A43Q9HB55 503 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RANGRFQ9HD47 186 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 IL1RAPQ9NPH3 570 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ASAH2Q9NR71 780 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SERINC1Q9NRX5 453 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RASSF1Q9NS23 344 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ANKEF1Q9NU02 776 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 DDX28Q9NUL7 540 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 IMP3Q9NV31 184 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SPATA6Q9NWH7 488 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 MCUBQ9NWR8 336 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 ERAP1Q9NZ08 941 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 WWOXQ9NZC7 414 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 IFT80Q9P2H3 777 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 POLLQ9UGP5 575 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 RUVBL1Q9Y265 456 aaKnown RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TP53TG5Q9Y2B4 290 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 DHRS7Q9Y394 339 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PCDHA10Q9Y5I2 948 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 KIAA1551Q9HCM1 1747 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 DOCK1Q14185 1865 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 PLIN4Q96Q06 1357 aa3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 TP53BP1Q12888 1972 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P8-201ENST00000449709 SPATA31A5Q5VU36 1347 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 SPATA31A3Q5VYP0 1347 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 SPATA31A7Q8IWB4 1347 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 A0A075B6Q4 140 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 A0A087WWL8 130 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 A0A1W2PPM1 405 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 CIB4A0PJX0 185 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 DENND3A2RUS2 1198 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 A8MXE2 369 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 TISP43B9A030 160 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 B9A039 149 aa3.48□□□□□ -1.85
HMGB3P8-201ENST00000449709 POC1B-GALNT4F8VUJ3 575 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms