RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DRD5P21918 477 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 CENPAP49450 140 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 CLCN4P51793 760 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 GRIK2Q13002 908 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF772Q68DY9 489 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ENTHD1Q8IYW4 607 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 TEX47Q8TBZ9 253 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 TSSK6Q9BXA6 273 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 GORASP2Q9H8Y8 452 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ITM2BQ9Y287 266 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 SESN1Q9Y6P5 492 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 COL1A2P08123 1366 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 GJA1P17302 382 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 SDC1P18827 310 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 APEX1P27695 318 aaKnown RBP11.95□□□□□ -0.5
UBE3B-204ENST00000449510 RYKP34925 604 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 MAP2K3P46734 347 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ACLYP53396 1101 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 MC1RQ01726 317 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 FBXO43Q4G163 708 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 SLC35F1Q5T1Q4 408 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 PXDC1Q5TGL8 231 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 MZT2AQ6P582 158 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 CEACAM20Q6UY09 585 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-204ENST00000449510 TSPAN33Q86UF1 283 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 CFAP206Q8IYR0 622 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF557Q8N988 423 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-204ENST00000449510 C12orf66Q96MD2 445 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 TMEM248Q9NWD8 314 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 NFKBIL1Q9UBC1 381 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-204ENST00000449510 CLEC2DQ9UHP7 191 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF225Q9UK10 706 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 HCN4Q9Y3Q4 1203 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 A0A1W2PRB8 838 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ANKRD28O15084 1053 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 PRLP01236 227 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 RLN1P04808 185 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 EBLN1P0CF75 366 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ADORA3P0DMS8 318 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 SPAM1P38567 509 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 TAS2R50P59544 299 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 RPS13P62277 151 aaKnown RBP11.95□□□□□ -0.5
UBE3B-204ENST00000449510 BNC1Q01954 994 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 STX4Q12846 297 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 TATDN3Q17R31 274 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 BCL2L15Q5TBC7 163 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ANXA8L1Q5VT79 327 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ARL9Q6T311 187 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 DPP10Q8N608 796 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 ARL14EPQ8N8R7 260 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-204ENST00000449510 LSM14AQ8ND56 463 aaKnown RBP11.95□□□□□ -0.5
UBE3B-204ENST00000449510 AKAP1Q92667 903 aaKnown RBP eCLIP11.95□□□□□ -0.5
UBE3B-204ENST00000449510 FOXJ1Q92949 421 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 NIPSNAP1Q9BPW8 284 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 TLR9Q9NR96 1032 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 SPAG17Q6Q759 2223 aa11.95□□□□□ -0.5
UBE3B-204ENST00000449510 WNT9AO14904 365 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 PDPK1O15530 556 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 ENTPD6O75354 484 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 DNAJB5O75953 348 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 CYP17A1P05093 508 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 PRG2P13727 222 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF157P51786 506 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF33AQ06730 810 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 MBTPS1Q14703 1052 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 PTGES3Q15185 160 aaKnown RBP11.94□□□□□ -0.5
UBE3B-204ENST00000449510 UBXN11Q5T124 520 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 TMIGD1Q6UXZ0 262 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF730Q6ZMV8 503 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 GPR149Q86SP6 731 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 DOK4Q8TEW6 326 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 ING5Q8WYH8 240 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 RHBGQ9H310 441 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 RUVBL1Q9Y265 456 aaKnown RBP11.94□□□□□ -0.5
UBE3B-204ENST00000449510 ASF1AQ9Y294 204 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 A0A0G2JLL6 359 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-204ENST00000449510 METTL15A6NJ78 407 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 CENPBD1B2RD01 187 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 RTCAO00442 366 aaKnown RBP11.94□□□□□ -0.5
UBE3B-204ENST00000449510 ARHGAP33O14559 1287 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 OR7A17O14581 309 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 KMOO15229 486 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 NCR1O76036 304 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 RETP07949 1114 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 CSKP41240 450 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 PSMD8P48556 350 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 TAS2R41P59536 307 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 UPP1Q16831 310 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 OR2G6Q5TZ20 316 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 PRRT2Q7Z6L0 340 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-204ENST00000449510 RAD51AP1Q96B01 352 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 DOHHQ9BU89 302 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 MUTYHQ9UIF7 546 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 PRSS21Q9Y6M0 314 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 MID1O15344 667 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 PRSS23O95084 383 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 ALAS2P22557 587 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 CLDN8P56748 225 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms