RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 EEDO75530 441 aaKnown RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 OR2B3O76000 313 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 G6PDP11413 515 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 BCKDHAP12694 445 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 IDO1P14902 403 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 SDC1P18827 310 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 RAE1P78406 368 aaKnown RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 ZFP36L1Q07352 338 aaKnown RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 TRA2AQ13595 282 aaKnown RBP eCLIP13.91□□□□□ -0.18
TNF-208ENST00000449264 SMU1Q2TAY7 513 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 TCTE1Q5JU00 501 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 OR4C11Q6IEV9 310 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 TMEM214Q6NUQ4 689 aaKnown RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 ABHD17CQ6PCB6 329 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 ABHD13Q7L211 337 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 PAGE2Q7Z2X7 111 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 GLRX5Q86SX6 157 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 OR8K5Q8NH50 307 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 OR1L3Q8NH93 324 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 UTP15Q8TED0 518 aaKnown RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 RNF31Q96EP0 1072 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 TMEM74Q96NL1 305 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 TSSK3Q96PN8 268 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 OR6C1Q96RD1 312 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 ZNF717Q9BY31 904 aaPredicted RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 LHX9Q9NQ69 397 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 BAIAP2L1Q9UHR4 511 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 ARHGAP10A1A4S6 786 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 TXNDC9O14530 226 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 ANXA4P09525 319 aaPredicted RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 FTH1P19P0C7X4 201 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 IL1RNP18510 177 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 TACR1P25103 407 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 CERS1P27544 350 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 BSGP35613 385 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 ITGA1P56199 1179 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 BTN3A2P78410 334 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 ACY1Q03154 408 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 SQLEQ14534 574 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 GSTA3Q16772 222 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 PRTGQ2VWP7 1150 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 DEFB134Q4QY38 66 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 CYP20A1Q6UW02 462 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 ZNF793Q6ZN11 406 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 PRSS41Q7RTY9 318 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 GPR135Q8IZ08 494 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 TTC29Q8NA56 475 aaPredicted RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 SRFBP1Q8NEF9 429 aaKnown RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 ZNF501Q96CX3 271 aaPredicted RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 C11orf24Q96F05 449 aaPredicted RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 METTL2AQ96IZ6 378 aaKnown RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 FCRL1Q96LA6 429 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 ZNF285Q96NJ3 590 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 TEFMQ96QE5 360 aaKnown RBP13.91□□□□□ -0.18
TNF-208ENST00000449264 MYLK2Q9H1R3 596 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 OCIAD1Q9NX40 245 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 CFAP54Q96N23 3096 aa13.91□□□□□ -0.18
TNF-208ENST00000449264 ZNF860A6NHJ4 632 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 EFCAB7A8K855 629 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 ALOX12P18054 663 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 TPP2P29144 1249 aaPredicted RBP13.9□□□□□ -0.18
TNF-208ENST00000449264 SIM1P81133 766 aaPredicted RBP13.9□□□□□ -0.18
TNF-208ENST00000449264 GRM7Q14831 915 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 MANEAQ5SRI9 462 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 CCNYL2Q5T2Q4 361 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 HES3Q5TGS1 186 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 CLNKQ7Z7G1 428 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 SLCO6A1Q86UG4 719 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 MIER2Q8N344 545 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 DTWD1Q8N5C7 304 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 FITM2Q8N6M3 262 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 AMER3Q8N944 861 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 AGBL5Q8NDL9 886 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 OR9I1Q8NGQ6 314 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 GFM2Q969S9 779 aaKnown RBP13.9□□□□□ -0.18
TNF-208ENST00000449264 C10orf90Q96M02 699 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 QRFPRQ96P65 431 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 TBCDQ9BTW9 1192 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 BRINP2Q9C0B6 783 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 ZNF385DQ9H6B1 395 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 SIDT1Q9NXL6 827 aaKnown RBP13.9□□□□□ -0.18
TNF-208ENST00000449264 ASIC5Q9NY37 505 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 MCM8Q9UJA3 840 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 GPR45Q9Y5Y3 372 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 CAPN7Q9Y6W3 813 aa13.9□□□□□ -0.18
TNF-208ENST00000449264 HYKKA2RU49 373 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 C9JVG2 144 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 CSO75390 466 aaKnown RBP13.89□□□□□ -0.19
TNF-208ENST00000449264 LRATO95237 230 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 MED26O95402 600 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 MSL3P1P0C860 447 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 PRPS2P11908 318 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 ACPPP15309 386 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 HIST1H1TP22492 207 aaPredicted RBP13.89□□□□□ -0.19
TNF-208ENST00000449264 CCKBRP32239 447 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 NOVA1P51513 510 aaKnown RBP13.89□□□□□ -0.19
TNF-208ENST00000449264 MAPK12P53778 367 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 ZNF763Q0D2J5 394 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 NDUFA9Q16795 377 aa13.89□□□□□ -0.19
TNF-208ENST00000449264 PRAMEF17Q5VTA0 474 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms