RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CSTF2P33240 577 aaKnown RBP eCLIP18.58■□□□□ 0.56
SGCE-207ENST00000447873 SSR2P43308 183 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 RAE1P78406 368 aaKnown RBP18.58■□□□□ 0.56
SGCE-207ENST00000447873 IRX1P78414 480 aaPredicted RBP18.58■□□□□ 0.56
SGCE-207ENST00000447873 ACY1Q03154 408 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 TMEM214Q6NUQ4 689 aaKnown RBP18.58■□□□□ 0.56
SGCE-207ENST00000447873 TRPM8Q7Z2W7 1104 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 MIER2Q8N344 545 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 CPSF7Q8N684 471 aaKnown RBP18.58■□□□□ 0.56
SGCE-207ENST00000447873 FITM2Q8N6M3 262 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 NETO1Q8TDF5 533 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 FCRL1Q96LA6 429 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 TBCDQ9BTW9 1192 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 ZNF717Q9BY31 904 aaPredicted RBP18.58■□□□□ 0.56
SGCE-207ENST00000447873 ZNF385DQ9H6B1 395 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 FGF21Q9NSA1 209 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 ARMCX1Q9P291 453 aa18.58■□□□□ 0.56
SGCE-207ENST00000447873 SCN3AQ9NY46 2000 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 GBAP04062 536 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 SDC1P18827 310 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 BSGP35613 385 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 TSFMP43897 325 aaKnown RBP18.57■□□□□ 0.56
SGCE-207ENST00000447873 ATP4BP51164 291 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 NME5P56597 212 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 INSM1Q01101 510 aaPredicted RBP18.57■□□□□ 0.56
SGCE-207ENST00000447873 PRTGQ2VWP7 1150 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 CCNYL2Q5T2Q4 361 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 CYP20A1Q6UW02 462 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 CLNKQ7Z7G1 428 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 GPR135Q8IZ08 494 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 BRINP2Q9C0B6 783 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 SPRTNQ9H040 489 aaPredicted RBP18.57■□□□□ 0.56
SGCE-207ENST00000447873 COPS7BQ9H9Q2 264 aaPredicted RBP18.57■□□□□ 0.56
SGCE-207ENST00000447873 LHX9Q9NQ69 397 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 PRDM7Q9NQW5 492 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 SDR39U1Q9NRG7 319 aaPredicted RBP18.57■□□□□ 0.56
SGCE-207ENST00000447873 BAIAP2L1Q9UHR4 511 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 MCM8Q9UJA3 840 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 SERTAD3Q9UJW9 196 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 ADAM29Q9UKF5 820 aa18.57■□□□□ 0.56
SGCE-207ENST00000447873 COL27A1Q8IZC6 1860 aaPredicted RBP18.57■□□□□ 0.56
SGCE-207ENST00000447873 HYKKA2RU49 373 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 C4orf51C9J302 202 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 GFRA3O60609 400 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 EEDO75530 441 aaKnown RBP18.56■□□□□ 0.56
SGCE-207ENST00000447873 CDK4P11802 303 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 ALOX12P18054 663 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 CCKBRP32239 447 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 PDX1P52945 283 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 BTN3A2P78410 334 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 GRM7Q14831 915 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 PTGR1Q14914 329 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 NDUFA9Q16795 377 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 PDCD4Q53EL6 469 aaKnown RBP18.56■□□□□ 0.56
SGCE-207ENST00000447873 FAM9CQ8IZT9 166 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 AGBL5Q8NDL9 886 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 OR1L3Q8NH93 324 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 TEFMQ96QE5 360 aaKnown RBP18.56■□□□□ 0.56
SGCE-207ENST00000447873 DDX31Q9H8H2 851 aaKnown RBP18.56■□□□□ 0.56
SGCE-207ENST00000447873 SLC22A7Q9Y694 548 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 CAPN7Q9Y6W3 813 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 SPEGQ15772 3267 aa18.56■□□□□ 0.56
SGCE-207ENST00000447873 A0A088AWK7 358 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 FITM1A5D6W6 292 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 TMX2-CTNND1H3BSU7 103 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 EBAG9O00559 213 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 SMIM10L1P0DMW3 83 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 CSRP1P21291 193 aaKnown RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 ZNF10P21506 573 aaPredicted RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 HIST1H1TP22492 207 aaPredicted RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 TACR1P25103 407 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 TPP2P29144 1249 aaPredicted RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 ADSLP30566 484 aaPredicted RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 ITGA1P56199 1179 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 FOXM1Q08050 763 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 C16orf72Q14CZ0 275 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 HERC3Q15034 1050 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 DEFB134Q4QY38 66 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 GARNL3Q5VVW2 1013 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 TTC29Q8NA56 475 aaPredicted RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 OR8K5Q8NH50 307 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 CLHC1Q8NHS4 586 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 ZNF501Q96CX3 271 aaPredicted RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 SMIM10Q96HG1 83 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 TSSK3Q96PN8 268 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 OR6C1Q96RD1 312 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 CCDC106Q9BWC9 280 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 ROGDIQ9GZN7 287 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 MRPS2Q9Y399 296 aaKnown RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 CCT8L1PA6NM43 557 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 PSMD12O00232 456 aaPredicted RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 SLC22A3O75751 556 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 B3GALT4O96024 378 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 PCSK2P16519 638 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 GPX3P22352 226 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 ATP5A1P25705 553 aaKnown RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 MRPL19P49406 292 aaKnown RBP18.55■□□□□ 0.56
SGCE-207ENST00000447873 MAPK12P53778 367 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 ZNF763Q0D2J5 394 aa18.55■□□□□ 0.56
SGCE-207ENST00000447873 KLF10Q13118 480 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms