RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ATP6V1B1P15313 513 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 CD72P21854 359 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 MAGEA2P43356 314 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 ALDH3A2P51648 485 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 DAG1Q14118 895 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 FAM180BQ6P0A1 224 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 ENPP7Q6UWV6 458 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 LPCAT2Q7L5N7 544 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 ADCK2Q7Z695 626 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 TMEM179BQ7Z7N9 219 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 SATL1Q86VE3 508 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 NAGSQ8N159 534 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 ZCCHC7Q8N3Z6 543 aaKnown RBP16.68■□□□□ 0.26
SMC6-206ENST00000446852 BMFQ96LC9 184 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 MRPS26Q9BYN8 205 aaKnown RBP16.68■□□□□ 0.26
SMC6-206ENST00000446852 TRIM4Q9C037 500 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 YIPF3Q9GZM5 350 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 SLC6A16Q9GZN6 736 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 FAM192AQ9GZU8 254 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 AHSPQ9NZD4 102 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 TBC1D29Q9UFV1 150 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 ARHGEF17Q96PE2 2063 aaPredicted RBP16.68■□□□□ 0.26
SMC6-206ENST00000446852 TCRBV21S2A2A0A5A6 115 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 G3V2T6 193 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 NARSO43776 548 aaKnown RBP16.67■□□□□ 0.26
SMC6-206ENST00000446852 H6PDO95479 791 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 ASGR2P07307 311 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 HOXC4P09017 264 aaPredicted RBP16.67■□□□□ 0.26
SMC6-206ENST00000446852 PPIBP23284 216 aaKnown RBP16.67■□□□□ 0.26
SMC6-206ENST00000446852 PEBP1P30086 187 aaKnown RBP16.67■□□□□ 0.26
SMC6-206ENST00000446852 CAPGP40121 348 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 CRYBA2P53672 197 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 CASP9P55211 416 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 SPIDRQ14159 915 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 NFATC4Q14934 902 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 COX20Q5RI15 118 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 TRIM69Q86WT6 500 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 ZDHHC13Q8IUH4 622 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 DHRSXQ8N5I4 330 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 JPH3Q8WXH2 748 aaPredicted RBP16.67■□□□□ 0.26
SMC6-206ENST00000446852 DNASE1L2Q92874 299 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 TRAPPC9Q96Q05 1148 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 RAB11FIP5Q9BXF6 653 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 PITHD1Q9GZP4 211 aaPredicted RBP16.67■□□□□ 0.26
SMC6-206ENST00000446852 ACSL6Q9UKU0 697 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 CORO2BQ9UQ03 480 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 H3BNH8 94 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 PRICKLE3O43900 615 aaPredicted RBP16.67■□□□□ 0.26
SMC6-206ENST00000446852 GABRG2P18507 467 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 AK4P27144 223 aaPredicted RBP16.67■□□□□ 0.26
SMC6-206ENST00000446852 SERPINB1P30740 379 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 CCINQ13939 588 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 VEZF1Q14119 521 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 VTCN1Q7Z7D3 282 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 OFCC1Q8IZS5 231 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 METTL25Q8N6Q8 603 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 DENND6BQ8NEG7 585 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 SLC35A5Q9BS91 424 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 SPATA9Q9BWV2 254 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 AICDAQ9GZX7 198 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 ABCG4Q9H172 646 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 TTYH1Q9H313 450 aaPredicted RBP16.67■□□□□ 0.26
SMC6-206ENST00000446852 CAAP1Q9H8G2 361 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 SLC6A20Q9NP91 592 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 MIEF1Q9NQG6 463 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 SPHK1Q9NYA1 384 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 RAPGEFL1Q9UHV5 662 aa16.67■□□□□ 0.26
SMC6-206ENST00000446852 GNGT2O14610 69 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 NDUFS4O43181 175 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 SEMG1P04279 462 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 HOXB3P14651 431 aaPredicted RBP16.66■□□□□ 0.26
SMC6-206ENST00000446852 PAX7P23759 505 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 MAPK12P53778 367 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 ADARB1P78563 741 aaKnown RBP16.66■□□□□ 0.26
SMC6-206ENST00000446852 ANKRD34AQ69YU3 496 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 RD3Q7Z3Z2 195 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 UBE3DQ7Z6J8 389 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 ZDHHC21Q8IVQ6 265 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMC6-206ENST00000446852 CCL4L1Q8NHW4 92 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 CREB3L4Q8TEY5 395 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 POP5Q969H6 163 aaKnown RBP16.66■□□□□ 0.26
SMC6-206ENST00000446852 TSACCQ96A04 125 aaPredicted RBP16.66■□□□□ 0.26
SMC6-206ENST00000446852 TM4SF18Q96CE8 201 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 RMND5BQ96G75 393 aaPredicted RBP16.66■□□□□ 0.26
SMC6-206ENST00000446852 TMEM121BQ9BXQ6 578 aaPredicted RBP16.66■□□□□ 0.26
SMC6-206ENST00000446852 SMURF2Q9HAU4 748 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 CD320Q9NPF0 282 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 VNN3Q9NY84 501 aa16.66■□□□□ 0.26
SMC6-206ENST00000446852 PPM1DO15297 605 aa16.65■□□□□ 0.26
SMC6-206ENST00000446852 CAPN5O15484 640 aaPredicted RBP16.65■□□□□ 0.26
SMC6-206ENST00000446852 ETFAP13804 333 aa16.65■□□□□ 0.26
SMC6-206ENST00000446852 ZIK1Q3SY52 487 aaPredicted RBP16.65■□□□□ 0.26
SMC6-206ENST00000446852 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMC6-206ENST00000446852 EOGTQ5NDL2 527 aa16.65■□□□□ 0.26
SMC6-206ENST00000446852 ANGPTL8Q6UXH0 198 aa16.65■□□□□ 0.26
SMC6-206ENST00000446852 ADHFE1Q8IWW8 467 aa16.65■□□□□ 0.26
SMC6-206ENST00000446852 FBXL6Q8N531 539 aa16.65■□□□□ 0.26
SMC6-206ENST00000446852 OR5AK3PQ8NH89 298 aa16.65■□□□□ 0.26
SMC6-206ENST00000446852 WDR92Q96MX6 357 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms