RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 LRRC58Q96CX6 371 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 TMEM109Q9BVC6 243 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 APOBEC3GQ9HC16 384 aaKnown RBP11.33□□□□□ -0.6
FN1-212ENST00000446046 PPP4R1LQ9P1A2 415 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 CHD5Q8TDI0 1954 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 PPEF2O14830 753 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 PROM1O43490 865 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 IDH3AP50213 366 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 TGM7Q96PF1 710 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 AIFM2Q9BRQ8 373 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 TNFRSF10DQ9UBN6 386 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 CYTH4Q9UIA0 394 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 A0A1B0GVI7 797 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 PRAMEF26H0Y7S4 382 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 CTSAP10619 480 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 HOXD8P13378 290 aaPredicted RBP11.33□□□□□ -0.6
FN1-212ENST00000446046 UQCRC2P22695 453 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 TNFSF4P23510 183 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 MC1RQ01726 317 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 REEP3Q6NUK4 255 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 AHSA2Q719I0 299 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 FAM47BQ8NA70 645 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 HDHD5Q9BXW7 423 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 MED28Q9H204 178 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 ANKRA2Q9H9E1 313 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 CIB4A0PJX0 185 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 PSMD9O00233 223 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 MAP2K7O14733 419 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 ZNF35P13682 527 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 CCNOP22674 350 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 ACSL1P33121 698 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 TNFRSF4P43489 277 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 DMWDQ09019 674 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 RBM48Q5RL73 367 aaKnown RBP11.33□□□□□ -0.6
FN1-212ENST00000446046 LIX1LQ8IVB5 337 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 TOP1MTQ969P6 601 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 OMA1Q96E52 524 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 RABL2AQ9UBK7 228 aaPredicted RBP11.33□□□□□ -0.6
FN1-212ENST00000446046 GHRLQ9UBU3 117 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 RABL2BQ9UNT1 228 aa11.33□□□□□ -0.6
FN1-212ENST00000446046 ASGR2P07307 311 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 ACRV1P26436 265 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 STOMP27105 288 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 UBE2NP61088 152 aaKnown RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 NR0B2Q15466 257 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 DCBLD1Q8N8Z6 715 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 C16orf70Q9BSU1 422 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 OXSMQ9NWU1 459 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 COL11A1P12107 1806 aaPredicted RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 A0A1B0GVC2 190 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 CDH1P12830 882 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 POLR2CP19387 275 aaPredicted RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 TOR1AIP2Q8NFQ8 470 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 OR13C4Q8NGS5 318 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 ARL5BQ96KC2 179 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 TPK1Q9H3S4 243 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 FN3KQ9H479 309 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 WDR55Q9H6Y2 383 aaPredicted RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 RIMKLBQ9ULI2 386 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 PIAS3Q9Y6X2 628 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 TBX1O43435 398 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 PRKCGP05129 697 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 HLA-EP13747 358 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 ENGP17813 658 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 HK1P19367 917 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 MSANTD1Q6ZTZ1 278 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 RBM12BQ8IXT5 1001 aaKnown RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 OR10Q1Q8NGQ4 319 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 COPS4Q9BT78 406 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 GPR160Q9UJ42 338 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 PDE10AQ9Y233 779 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 PEX16Q9Y5Y5 336 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 TRPM3Q9HCF6 1732 aaPredicted RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 BLACEA4D250 179 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 OR6C74A6NCV1 312 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 EIF3FO00303 357 aaPredicted RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 RPLP0P05388 317 aaKnown RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 STC1P52823 247 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 NIPAL4Q0D2K0 466 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 RPA4Q13156 261 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 RAB33AQ14088 237 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 OR56A3Q8NH54 315 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 NXPE3Q969Y0 559 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 ZNF689Q96CS4 500 aaPredicted RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 PTCHD1Q96NR3 888 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 NGBQ9NPG2 151 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 WASF2Q9Y6W5 498 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 PAK4O96013 591 aaPredicted RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 BCHEP06276 602 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 LSM3P62310 102 aaKnown RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 SLCO6A1Q86UG4 719 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 THEM6Q8WUY1 208 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 HLA-CQ95604 372 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 KCNK13Q9HB14 408 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 TMEM98Q9Y2Y6 226 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 PRH1P02810 166 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 MYCLP1P12525 358 aaPredicted RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 S100A1P23297 94 aa11.32□□□□□ -0.6
FN1-212ENST00000446046 CDKN1CP49918 316 aaPredicted RBP11.32□□□□□ -0.6
FN1-212ENST00000446046 PUDPQ08623 228 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms