RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 HNF4AP41235 474 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 HSPA7P48741 367 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 E2F2Q14209 437 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 SLBPQ14493 270 aaKnown RBP eCLIP17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 NSDHLQ15738 373 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 WHAMMP3Q1A5X7 153 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 BTBD16Q32M84 506 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 SFT2D3Q587I9 215 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 TOR1AIP1Q5JTV8 583 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 TMIGD1Q6UXZ0 262 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 VN1R5Q7Z5H4 357 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 OR1N1Q8NGS0 311 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 SEC16BQ96JE7 1060 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 PITHD1Q9GZP4 211 aaPredicted RBP17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 CNOT10Q9H9A5 744 aaKnown RBP17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 AGPAT4Q9NRZ5 378 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 IGSF5Q9NSI5 407 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 DNAJC11Q9NVH1 559 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 ASB1Q9Y576 335 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 DOPEY1Q5JWR5 2465 aa17.79■□□□□ 0.44
HMGB3P22-201ENST00000442010 LRIT2A6NDA9 550 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 ANKUB1A6NFN9 424 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 H2AFYO75367 372 aaKnown RBP17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 URI1O94763 535 aaPredicted RBP17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 AGFG2O95081 481 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 CD22P20273 847 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 JAK1P23458 1154 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 GSTM2P28161 218 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 HNRNPH1P31943 449 aaKnown RBP17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 ADPRMQ3LIE5 342 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 UBAP2Q5T6F2 1119 aaKnown RBP17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 PAPD4Q6PIY7 484 aaKnown RBP17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 QSOX2Q6ZRP7 698 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 RELL1Q8IUW5 271 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 CA13Q8N1Q1 262 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 MMGT1Q8N4V1 131 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 ST6GALNAC3Q8NDV1 305 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 TTLQ8NG68 377 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 PRR7Q8TB68 274 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 M1APQ8TC57 530 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 FAR1Q8WVX9 515 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 MS4A6EQ96DS6 147 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 ATOH8Q96SQ7 321 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 NPAS2Q99743 824 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 MMP25Q9NPA2 562 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 CD274Q9NZQ7 290 aa17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 ZNF490Q9ULM2 529 aaPredicted RBP17.78■□□□□ 0.44
HMGB3P22-201ENST00000442010 UTP20O75691 2785 aaKnown RBP17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 IGKV3D-11A0A0A0MRZ8 115 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 TRAV17A0A0B4J275 112 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 B4GALT2O60909 372 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 CLEC3AO75596 197 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 F10P00742 488 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 CRABP2P29373 138 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 BTG2P78543 158 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 SLMAPQ14BN4 828 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 EXT1Q16394 746 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 ZNF324BQ6AW86 544 aaPredicted RBP17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 ADNP2Q6IQ32 1131 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 KRT78Q8N1N4 520 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 STAG3L4Q8TBR4 150 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 GAL3ST3Q96A11 431 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 TAAR6Q96RI8 345 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 LPAR4Q99677 370 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 SLX1AQ9BQ83 275 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 ALG9Q9H6U8 611 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 NMRAL1Q9HBL8 299 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 STMN3Q9NZ72 180 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 DMGDHQ9UI17 866 aaKnown RBP17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 RNF112Q9ULX5 631 aa17.77■□□□□ 0.44
HMGB3P22-201ENST00000442010 OR5H15A6NDH6 313 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 WIPF3A6NGB9 483 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 FAM227AF5H4B4 570 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 CLGNO14967 610 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 KERAO60938 352 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 LTA4HP09960 611 aaKnown RBP17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 RNH1P13489 461 aaKnown RBP17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 TFEBP19484 476 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 OR4D2P58180 307 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 SLC26A5P58743 744 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 STXBP1P61764 594 aaKnown RBP17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 ZNF33BQ06732 778 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 RUNX2Q13950 521 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 DOC2AQ14183 400 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 PDK4Q16654 411 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 ABHD17BQ5VST6 288 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 RAPH1Q70E73 1250 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 CENPLQ8N0S6 344 aaPredicted RBP17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 NOA1Q8NC60 698 aaKnown RBP17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 SSC4DQ8WTU2 575 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 UBTD2Q8WUN7 234 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 NXNL1Q96CM4 212 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 PTCD3Q96EY7 689 aaKnown RBP17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 PTCHD1Q96NR3 888 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 QRFPRQ96P65 431 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 FUT8Q9BYC5 575 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 CD244Q9BZW8 370 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 RHBGQ9H310 441 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 NINJ2Q9NZG7 142 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 NUDT4Q9NZJ9 180 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms