RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 GGT5P36269 586 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 GP5P40197 560 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 SLC26A5P58743 744 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 TAS2R50P59544 299 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 RAB8AP61006 207 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 STXBP1P61764 594 aaKnown RBP15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 TUBA3CQ13748 450 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 ZKSCAN8Q15776 578 aaPredicted RBP15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 ZNF766Q5HY98 468 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 CDKL4Q5MAI5 379 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 FCRLBQ6BAA4 426 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 TUBA3EQ6PEY2 450 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 MDS2Q8NDY4 140 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 ELP5Q8TE02 316 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 GAL3ST3Q96A11 431 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 UTP23Q9BRU9 249 aaKnown RBP15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 EHD1Q9H4M9 534 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 CNOT10Q9H9A5 744 aaKnown RBP15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 TEX15Q9BXT5 2789 aa15.28■□□□□ 0.04
SNRPD3-204ENST00000439775 TCRBV16S1A1N1A0A5B0 115 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 SAGE2PA6NJ88 616 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 PSMD12O00232 456 aaPredicted RBP15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 B4GALT2O60909 372 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 H2AFYO75367 372 aaKnown RBP15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 CCDC166P0CW27 439 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 CD1DP15813 335 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 STMN1P16949 149 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 HNF4AP41235 474 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 GDF5P43026 501 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 KCNK10P57789 538 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 ATP6V0D1P61421 351 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 C18orf21Q32NC0 220 aaPredicted RBP15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 TOR1AIP1Q5JTV8 583 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 TMIGD1Q6UXZ0 262 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 C3orf62Q6ZUJ4 267 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 RELTQ969Z4 430 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 SCMH1Q96GD3 660 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 PTCHD1Q96NR3 888 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 TMEM79Q9BSE2 394 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 AICDAQ9GZX7 198 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 KLHL31Q9H511 634 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 NT5DC2Q9H857 520 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 CAB39LQ9H9S4 337 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 PRDM9Q9NQV7 894 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 WWOXQ9NZC7 414 aa15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 UTP11Q9Y3A2 253 aaKnown RBP15.27■□□□□ 0.04
SNRPD3-204ENST00000439775 SCN3AQ9NY46 2000 aa15.27■□□□□ 0.03
SNRPD3-204ENST00000439775 SCN2AQ99250 2005 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 NCF1BA6NI72 391 aaPredicted RBP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 GABRR3A8MPY1 467 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 NCF1CA8MVU1 366 aaPredicted RBP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 PHGDHO43175 533 aaKnown RBP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 MAN1A2O60476 641 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 NCF1P14598 390 aaPredicted RBP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 MST1P26927 711 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 HNRNPH1P31943 449 aaKnown RBP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 HPDP32754 393 aaPredicted RBP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 CD96P40200 585 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 GPX6P59796 221 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 BTG2P78543 158 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 CAV1Q03135 178 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 C2orf54Q08AI8 447 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 SLBPQ14493 270 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 OR1C1Q15619 314 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 ZRSR2Q15696 482 aaKnown RBP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.26■□□□□ 0.031e-7■□□□□ 11.2
SNRPD3-204ENST00000439775 SULT1C3Q6IMI6 304 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 GFRALQ6UXV0 394 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 GPSM1Q86YR5 675 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 KRT78Q8N1N4 520 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 CA13Q8N1Q1 262 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 SPATA6LQ8N4H0 392 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 HORMAD2Q8N7B1 307 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 PDPRQ8NCN5 879 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 UBXN10Q96LJ8 280 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 SIGLEC12Q96PQ1 595 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 NPLQ9BXD5 320 aaPredicted RBP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 UNKQ9C0B0 810 aaKnown RBP15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 RAB17Q9H0T7 212 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 DNAJC11Q9NVH1 559 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 SEC14L3Q9UDX4 400 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 MMACHCQ9Y4U1 282 aa15.26■□□□□ 0.03
SNRPD3-204ENST00000439775 A0A088AWK7 358 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 LRIT2A6NDA9 550 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 TAPBPO15533 448 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 CLEC3AO75596 197 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 UNC5CO95185 931 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 MAOAP21397 527 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 ZNF10P21506 573 aaPredicted RBP15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 SPRP35270 261 aaPredicted RBP15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 DCTP40126 519 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 RAB10P61026 200 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 ETF1P62495 437 aaKnown RBP15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 PMP22Q01453 160 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 TERF2Q15554 542 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 OR4D1Q15615 310 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 ADPRMQ3LIE5 342 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 C1QL3Q5VWW1 255 aa15.25■□□□□ 0.03
SNRPD3-204ENST00000439775 FJX1Q86VR8 437 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms