RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 HLA-FP30511 346 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 EPHA5P54756 1037 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 SELENOWP63302 87 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 MAPK11Q15759 364 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 TIGD6Q17RP2 521 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 ADNP2Q6IQ32 1131 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 AGTRAPQ6RW13 159 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 SLC46A3Q7Z3Q1 461 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 CCDC103Q8IW40 242 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 NAGSQ8N159 534 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 SLC5A8Q8N695 610 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 OR10G2Q8NGC3 310 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 CHTF18Q8WVB6 975 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 ATL1Q8WXF7 558 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 GGHQ92820 318 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 POLE4Q9NR33 117 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 PCDHGA2Q9Y5H1 932 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 A0A1W2PQ67 120 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 CLCA1A8K7I4 914 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 RNASET2O00584 256 aaKnown RBP15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 PCDH7O60245 1069 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 MOSPD3O75425 235 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 PTX3P26022 381 aaPredicted RBP15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 GSSP48637 474 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 TMED10P49755 219 aaKnown RBP15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 MVDP53602 400 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 DCDC1P59894 354 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 NTHL1P78549 312 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 LRRC74AQ0VAA2 488 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 NAE1Q13564 534 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 TEAD2Q15562 447 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 SPIN4Q56A73 249 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 COL13A1Q5TAT6 717 aaPredicted RBP15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 USP43Q70EL4 1123 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 ARMC8Q8IUR7 673 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 CMTM8Q8IZV2 173 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 OR4A15Q8NGL6 344 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 PSMA8Q8TAA3 256 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 SPPL2AQ8TCT8 520 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 FAM83CQ9BQN1 747 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 NXF2Q9GZY0 626 aaKnown RBP15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 SP140LQ9H930 580 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 POFUT2Q9Y2G5 429 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 TMEM202A6NGA9 273 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 AGAP5A6NIR3 686 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 HNRNPA1P09651 372 aaKnown RBP eCLIP15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 HLA-EP13747 358 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 ANXA8P13928 327 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 ZNF30P17039 623 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 GABRB1P18505 474 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 TIA1P31483 386 aaKnown RBP eCLIP15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 LYSMD2Q8IV50 215 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 CHST14Q8NCH0 376 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 GOT1L1Q8NHS2 421 aaPredicted RBP15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 HPS1Q92902 700 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 SCAMP4Q969E2 229 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 CXorf40BQ96DE9 158 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 MED8Q96G25 268 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 HEPHQ9BQS7 1158 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 NKX2-4Q9H2Z4 354 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 FAM83DQ9H4H8 585 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 CPNE5Q9HCH3 593 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 ZNF226Q9NYT6 803 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 ANKMY1Q9P2S6 941 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 SPASTQ9UBP0 616 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 ATP6V1HQ9UI12 483 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 EXO1Q9UQ84 846 aaKnown RBP15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 CCL26Q9Y258 94 aa15.74■□□□□ 0.11
CLCNKA-203ENST00000439316 MGAT4DA6NG13 374 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 SAGE2PA6NJ88 616 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 LEFTY2O00292 366 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 TNFRSF21O75509 655 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 E2F2Q14209 437 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 ELOAQ14241 798 aaKnown RBP15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 ZNF181Q2M3W8 571 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 FBXO43Q4G163 708 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 IFI44LQ53G44 452 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 ZNF385BQ569K4 471 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 HSD11B1LQ7Z5J1 315 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 GRASPQ7Z6J2 395 aaPredicted RBP15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 OR7G3Q8NG95 312 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 OR56A3Q8NH54 315 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 BHLHE41Q9C0J9 482 aaPredicted RBP15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 RAD18Q9NS91 495 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 RLIMQ9NVW2 624 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 GPATCH2Q9NW75 528 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 CCDC59Q9P031 241 aaKnown RBP15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 SLCO3A1Q9UIG8 710 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 SLC25A13Q9UJS0 675 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 UGT2A1Q9Y4X1 527 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 OR2AG2A6NM03 316 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 A8MVJ9 347 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 COQ9O75208 318 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 FGF19O95750 216 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 OPN1SWP03999 348 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 RPLP0P05388 317 aaKnown RBP15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 ADORA3P0DMS8 318 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 TNFRSF1BP20333 461 aa15.73■□□□□ 0.11
CLCNKA-203ENST00000439316 IMPA1P29218 277 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms