RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 EVC2Q86UK5 1308 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 CACNA1CQ13936 2221 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 FAM237BA0A1B0GVD1 139 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 A0A1W2PPH5 198 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 A0A1W2PRB8 838 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 MSGN1A6NI15 193 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 PEX14O75381 377 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 GPC4O75487 556 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 PRKRAO75569 313 aaKnown RBP2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 GPIP06744 558 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 PGK2P07205 417 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 EPCAMP16422 314 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 BSGP35613 385 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 PGFP49763 221 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 GSDMDP57764 484 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 E2F5Q15329 346 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 SLC25A30Q5SVS4 291 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 SPOUT1Q5T280 376 aaKnown RBP2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 WLSQ5T9L3 541 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 ACSM2BQ68CK6 577 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 FIP1L1Q6UN15 594 aaKnown RBP2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 R3HCC1LQ7Z5L2 792 aaKnown RBP2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 LACC1Q8IV20 430 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 THNSL1Q8IYQ7 743 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 MARVELD2Q8N4S9 558 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 LRRC17Q8N6Y2 441 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 TSPYL6Q8N831 410 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 FRMD1Q8N878 549 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 OR5AP2Q8NGF4 316 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 ROBO4Q8WZ75 1007 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 RRP36Q96EU6 259 aaKnown RBP2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 USP28Q96RU2 1077 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 SLC22A12Q96S37 553 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 SECISBP2Q96T21 854 aaKnown RBP2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 MYH16Q9H6N6 1097 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 KAT14Q9H8E8 782 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 MCCC2Q9HCC0 563 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 SMC4Q9NTJ3 1288 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 NUDT4Q9NZJ9 180 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 MAN1B1Q9UKM7 699 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 RIPK3Q9Y572 518 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 USP16Q9Y5T5 823 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 SPIN1Q9Y657 262 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 LAMA4Q16363 1823 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 TNRC6BQ9UPQ9 1833 aaKnown RBP2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 CLUHO75153 1309 aa2.37□□□□□ -2.03
HMGB1P18-201ENST00000438801 TDRD15B5MCY1 1934 aaKnown RBP2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 MCM3APO60318 1980 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 IGHV3OR16-10A0A075B7F0 116 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 A0A1W2PN81 502 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 ELOVL7A1L3X0 281 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 EPM2AB3EWF7 344 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 E9PI62 339 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 SOCS3O14543 225 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 SCAMP1O15126 338 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 TPD52L2O43399 206 aaKnown RBP2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 RTN3O95197 1032 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 CLDN9O95484 217 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 SERPINF2P08697 491 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 KRTAP1-4P0C5Y4 121 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 CHRNA7P36544 502 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 ERVPABLB-1P60509 514 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 PLA2G7Q13093 441 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 NFATC2Q13469 925 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZRSR2Q15696 482 aaKnown RBP2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 PTGISQ16647 500 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 PCGF3Q3KNV8 242 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 Q6ZR54 194 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 TLK2Q86UE8 772 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 HOGA1Q86XE5 327 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 C11orf53Q8IXP5 236 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 TMTC2Q8N394 836 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 CPSF7Q8N684 471 aaKnown RBP2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 TEX19Q8NA77 164 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 ETNPPLQ8TBG4 499 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 FAM151AQ8WW52 585 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 SEPT8Q92599 483 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 RASL10AQ92737 203 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 DDOQ99489 341 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 POLR3GLQ9BT43 218 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 HGH1Q9BTY7 390 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 PITPNM3Q9BZ71 974 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 WWTR1Q9GZV5 400 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 PDCL3Q9H2J4 239 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 ATP13A3Q9H7F0 1226 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 PREBQ9HCU5 417 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 NPAP1Q9NZP6 1156 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 FBXL17Q9UF56 701 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 TRMT112Q9UI30 125 aaKnown RBP2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 KCNE2Q9Y6J6 123 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 DOCK9Q9BZ29 2069 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 CMYA5Q8N3K9 4069 aa2.36□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZNF106Q9H2Y7 1883 aaKnown RBP2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 COL4A2P08572 1712 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 IGLV3-10A0A075B6K4 115 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 TCP11X1B4DZS4 312 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 NDUFS4O43181 175 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 GJB3O75712 270 aa2.35□□□□□ -2.03
HMGB1P18-201ENST00000438801 GH2P01242 217 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms