RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SAP30O75446 220 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 CRCPO75575 148 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 GRAP2O75791 330 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 CCDC159P0C7I6 412 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 EEF2P13639 858 aaKnown RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 P4HA1P13674 534 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 MYOGP15173 224 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 DPEP1P16444 411 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 PAX7P23759 505 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 CCND3P30281 292 aaPredicted RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 DUTP33316 252 aaKnown RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 OPRL1P41146 370 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 FRKP42685 505 aaPredicted RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 TMEM50BP56557 158 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 OR1D5P58170 312 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 AP1B1Q10567 949 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 TRA2AQ13595 282 aaKnown RBP eCLIP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 PKN2Q16513 984 aaKnown RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 SMU1Q2TAY7 513 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 FUT11Q495W5 492 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 FAM106AQ4KMX7 169 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 PARP10Q53GL7 1025 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 ZNF542PQ5EBM4 170 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 ARMCX4Q5H9R4 360 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 ALKBH5Q6P6C2 394 aaKnown RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 C16orf87Q6PH81 154 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 DHRS11Q6UWP2 260 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 METTL7BQ6UX53 244 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 FRRS1Q6ZNA5 592 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 C15orf52Q6ZUT6 534 aaKnown RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 COX8CQ7Z4L0 72 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 NLRP14Q86W24 1093 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 TUSC5Q8IXB3 177 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 IQCF2Q8IXL9 164 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 TMEM99Q8N816 258 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 AMER3Q8N944 861 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 UXS1Q8NBZ7 420 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 OR7G3Q8NG95 312 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 ZNF519Q8TB69 540 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 N4BP2L2Q92802 583 aaPredicted RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 CASP10Q92851 521 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 MOCOSQ96EN8 888 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 SYT11Q9BT88 431 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 UTP14AQ9BVJ6 771 aaKnown RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 IDI2Q9BXS1 227 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 TRIM7Q9C029 511 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 ABCG4Q9H172 646 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 SPHK2Q9NRA0 654 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 PHPT1Q9NRX4 125 aaPredicted RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 HPF1Q9NWY4 346 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 NDE1Q9NXR1 346 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 SEPT10Q9P0V9 454 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 DNAJB9Q9UBS3 223 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 XPO7Q9UIA9 1087 aaKnown RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 LIPT1Q9Y234 373 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 NCKAP1Q9Y2A7 1128 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 WIPI2Q9Y4P8 454 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 ABCC9O60706 1549 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 PFASO15067 1338 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 A0A087WZ39 114 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 hCG_38984A0A1B0GV85 526 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 C2orf92A0A1B0GVN3 265 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 MTMR11A4FU01 709 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 E5RGE8 158 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 H7C423 109 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 PGRMC2O15173 223 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 SLC7A4O43246 635 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 MTRF1O75570 445 aaKnown RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 CLDN1O95832 211 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 SUPT20HL2P0C7V6 817 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 C8orf89P0DMQ9 161 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 SNU13P55769 128 aaKnown RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 GSCP56915 257 aaPredicted RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 ERVK-16P61578 105 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 IRX4P78413 519 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 FOLH1Q04609 750 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 ARHGAP1Q07960 439 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 GRB14Q14449 540 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 FASTKD3Q14CZ7 662 aaKnown RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 FCN2Q15485 313 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 TAF7Q15545 349 aaPredicted RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 TYSND1Q2T9J0 566 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 KBTBD12Q3ZCT8 623 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 CES4AQ5XG92 561 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 TCEAL6Q6IPX3 200 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 ZNF613Q6PF04 617 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 KIF6Q6ZMV9 814 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 SIAH3Q8IW03 269 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 CLYBLQ8N0X4 340 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 PSMA8Q8TAA3 256 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 GTF3AQ92664 365 aaKnown RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 TEKT1Q969V4 418 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 LURAP1Q96LR2 239 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 C2orf48Q96LS8 159 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 PI4K2AQ9BTU6 479 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 CCDC94Q9BW85 323 aaPredicted RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 ACAT2Q9BWD1 397 aa3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 UPF3AQ9H1J1 476 aaKnown RBP3.23□□□□□ -1.89
LSM1P1-201ENST00000438629 SRD5A3Q9H8P0 318 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms