RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 PBKQ96KB5 322 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 NDNQ99608 321 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 MACROD1Q9BQ69 325 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 NAT9Q9BTE0 207 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 AARSD1Q9BTE6 412 aaKnown RBP7.31□□□□□ -1.24
VPS50-204ENST00000438395 ATG10Q9H0Y0 220 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 ANKRD10Q9NXR5 420 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 DNAJB12Q9NXW2 375 aaKnown RBP7.31□□□□□ -1.24
VPS50-204ENST00000438395 SLC22A7Q9Y694 548 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 MTORP42345 2549 aa7.31□□□□□ -1.24
VPS50-204ENST00000438395 C2CD3Q4AC94 2353 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 FEZF1A0PJY2 475 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 MAGEB17A8MXT2 336 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 NPIPA5E9PKD4 350 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 FCHO1O14526 889 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 SLC16A5O15375 505 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 PRMT3O60678 531 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 SLC25A12O75746 678 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 HAUS5O94927 633 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 FHP07954 510 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 SNRPB2P08579 225 aaKnown RBP7.3□□□□□ -1.24
VPS50-204ENST00000438395 ALOX12P18054 663 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 MST1P26927 711 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 FNTAP49354 379 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 MEF2AQ02078 507 aaPredicted RBP7.3□□□□□ -1.24
VPS50-204ENST00000438395 PWP1Q13610 501 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 TUBA3CQ13748 450 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 CSHL1Q14406 222 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 USP10Q14694 798 aaKnown RBP7.3□□□□□ -1.24
VPS50-204ENST00000438395 KCTD19Q17RG1 926 aaPredicted RBP7.3□□□□□ -1.24
VPS50-204ENST00000438395 DEFB134Q4QY38 66 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 KRTCAP3Q53RY4 240 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 TTC27Q6P3X3 843 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 TUBA3EQ6PEY2 450 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 LCTLQ6UWM7 567 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 MBOAT1Q6ZNC8 495 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 KIAA0408Q6ZU52 694 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 SLC26A11Q86WA9 606 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 CRLF3Q8IUI8 442 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 LRRC56Q8IYG6 542 aaPredicted RBP7.3□□□□□ -1.24
VPS50-204ENST00000438395 LGI4Q8N135 537 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 GHDCQ8N2G8 530 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 ARHGEF39Q8N4T4 335 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 MFSD9Q8NBP5 474 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 KCT2Q8NC54 265 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 THAP3Q8WTV1 239 aaPredicted RBP7.3□□□□□ -1.24
VPS50-204ENST00000438395 CHTF18Q8WVB6 975 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 EEF1AKMT1Q8WVE0 214 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 GPR137Q96N19 417 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 SGPP1Q9BX95 441 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 SYNPO2LQ9H987 977 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 MMP25Q9NPA2 562 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 ZFATQ9P243 1243 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 LRFN1Q9P244 771 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 TINAGQ9UJW2 476 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 NPIPA1Q9UND3 350 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 PDE10AQ9Y233 779 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 PPP2R2CQ9Y2T4 447 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 JRKLQ9Y4A0 524 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 PCDHGB6Q9Y5F9 930 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 DOCK10Q96BY6 2186 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 PKDREJQ9NTG1 2253 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 NUP210LQ5VU65 1888 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 ZGRF1Q86YA3 2104 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 F8P00451 2351 aa7.3□□□□□ -1.24
VPS50-204ENST00000438395 CCDC88CQ9P219 2028 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 TRBC2A0A5B9 178 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 PRRG2O14669 202 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 TFECO14948 347 aaPredicted RBP7.29□□□□□ -1.24
VPS50-204ENST00000438395 B4GALT2O60909 372 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 GUCA1CO95843 209 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 TSPAN12O95859 305 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 ENO2P09104 434 aaPredicted RBP7.29□□□□□ -1.24
VPS50-204ENST00000438395 RNH1P13489 461 aaKnown RBP7.29□□□□□ -1.24
VPS50-204ENST00000438395 PRF1P14222 555 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 CD96P40200 585 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 HNF4AP41235 474 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 MAGEA3P43357 314 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 CYB561P49447 251 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 RHAGQ02094 409 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 C3AR1Q16581 482 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 MAPKAPK3Q16644 382 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 PHKG1Q16816 387 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 ZNF630Q2M218 657 aaPredicted RBP7.29□□□□□ -1.24
VPS50-204ENST00000438395 BBS9Q3SYG4 887 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 SPANXN3Q5MJ09 141 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 DUPD1Q68J44 220 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 PAQR3Q6TCH7 311 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 CYHR1Q6ZMK1 362 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 FRA10AC1Q70Z53 315 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 GALNTL5Q7Z4T8 443 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 PCGF5Q86SE9 256 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 RPS19BP1Q86WX3 136 aaKnown RBP7.29□□□□□ -1.24
VPS50-204ENST00000438395 PDSS2Q86YH6 399 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 PDIK1LQ8N165 341 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 C2CD4AQ8NCU7 369 aaPredicted RBP7.29□□□□□ -1.24
VPS50-204ENST00000438395 SLC5A11Q8WWX8 675 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 TSLPQ969D9 159 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 PYCR2Q96C36 320 aa7.29□□□□□ -1.24
VPS50-204ENST00000438395 CFAP36Q96G28 342 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms