RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 HBA1P69905 142 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 ABATP80404 500 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 MC1RQ01726 317 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 APOFQ13790 326 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.57■■□□□ 1.52
CPNE1-216ENST00000437340 FOXB2Q5VYV0 432 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 KIAA1324Q6UXG2 1013 aaKnown RBP24.57■■□□□ 1.52
CPNE1-216ENST00000437340 FAM47BQ8NA70 645 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 TBC1D20Q96BZ9 403 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 PRDM8Q9NQV8 689 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 ADAM29Q9UKF5 820 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 ICKQ9UPZ9 632 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 MYRFQ9Y2G1 1151 aa24.57■■□□□ 1.52
CPNE1-216ENST00000437340 OR52A4PA6NMU1 304 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 G3V2T6 193 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 GNGT2O14610 69 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 CAPN5O15484 640 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-216ENST00000437340 CLEC3AO75596 197 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 APBB3O95704 486 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 ALPLP05186 524 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 PABPC4LP0CB38 370 aaKnown RBP24.56■■□□□ 1.52
CPNE1-216ENST00000437340 NDUFV2P19404 249 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 VAC14Q08AM6 782 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 BIRC2Q13490 618 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 PUS10Q3MIT2 529 aaKnown RBP24.56■■□□□ 1.52
CPNE1-216ENST00000437340 LRRC23Q53EV4 343 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-216ENST00000437340 CYBRD1Q53TN4 286 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 WASH2PQ6VEQ5 465 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 RPLP0P6Q8NHW5 317 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 PNPT1Q8TCS8 783 aaKnown RBP24.56■■□□□ 1.52
CPNE1-216ENST00000437340 F2RL3Q96RI0 385 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 EPB41L1Q9H4G0 881 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 KIR3DX1Q9H7L2 352 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 MIEF1Q9NQG6 463 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 COLEC10Q9Y6Z7 277 aa24.56■■□□□ 1.52
CPNE1-216ENST00000437340 FEZF1A0PJY2 475 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 LRRC72A6NJI9 287 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 H3BNH8 94 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 OR1F1O43749 312 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 C6orf47O95873 294 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 DDCP20711 480 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 HNRNPA2B1P22626 353 aaKnown RBP24.55■■□□□ 1.52
CPNE1-216ENST00000437340 GSTM2P28161 218 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 CYP4F2P78329 520 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 TEAD4Q15561 434 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 MPEG1Q2M385 716 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 OTUD3Q5T2D3 398 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-216ENST00000437340 TMEM92Q6UXU6 159 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 CBLL1Q75N03 491 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 EIF3MQ7L2H7 374 aaKnown RBP24.55■■□□□ 1.52
CPNE1-216ENST00000437340 STK32CQ86UX6 486 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 RGMAQ96B86 450 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 RMND5BQ96G75 393 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-216ENST00000437340 MSANTD3Q96H12 275 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 WDR92Q96MX6 357 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 XKR8Q9H6D3 395 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 TAS2R9Q9NYW1 312 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 USE1Q9NZ43 259 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 UTS2RQ9UKP6 389 aa24.55■■□□□ 1.52
CPNE1-216ENST00000437340 SMIM31A0A1B0GVY4 71 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 TRBC2A0A5B9 178 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 MAP3K13O43283 966 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 PRICKLE3O43900 615 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-216ENST00000437340 HTR1BP28222 390 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 NDUFS1P28331 727 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 PCGF2P35227 344 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 NUP214P35658 2090 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-216ENST00000437340 TPMTP51580 245 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 MAPK12P53778 367 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 ADARB1P78563 741 aaKnown RBP24.54■■□□□ 1.52
CPNE1-216ENST00000437340 ABRAXAS1Q6UWZ7 409 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 NUDT13Q86X67 352 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 OR52N2Q8NGI0 321 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 OR5K1Q8NHB7 308 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 CYGBQ8WWM9 190 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 ZNF764Q96H86 408 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-216ENST00000437340 DPH2Q9BQC3 489 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-216ENST00000437340 SORBS1Q9BX66 1292 aaKnown RBP24.54■■□□□ 1.52
CPNE1-216ENST00000437340 RAD21L1Q9H4I0 556 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 IL1RAPQ9NPH3 570 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 MMP17Q9ULZ9 603 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 IGKV1-8A0A0C4DH67 115 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 ZNF682O95780 498 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 SEMG1P04279 462 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 TFAP2AP05549 437 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 CD72P21854 359 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 ACSL1P33121 698 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 CLDN2P57739 230 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 EPS8Q12929 822 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 FADDQ13158 208 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 HEPACAMQ14CZ8 416 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 ENPP7Q6UWV6 458 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 USP51Q70EK9 711 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 CLEC4FQ8N1N0 589 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 C11orf65Q8NCR3 313 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 OR1E3Q8WZA6 343 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 CIDECQ96AQ7 238 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-216ENST00000437340 SLC35A5Q9BS91 424 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 TMEM184CQ9NVA4 438 aa24.54■■□□□ 1.52
CPNE1-216ENST00000437340 A0A1W2PRB8 838 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms