RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PON3Q15166 354 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 HSH2DQ96JZ2 352 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 TBX1O43435 398 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 NUAK1O60285 661 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 CD9P21926 228 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 TRAM2Q15035 370 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 THOC7Q6I9Y2 204 aaKnown RBP15.33■□□□□ 0.04
PTPN13-204ENST00000436978 UBE2J2Q8N2K1 259 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 SNTG1Q9NSN8 517 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 PCDHGB6Q9Y5F9 930 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 GATMP50440 423 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 UFM1P61960 85 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 PRTFDC1Q9NRG1 225 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 SCML1Q9UN30 329 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 RBM34P42696 430 aaKnown RBP15.32■□□□□ 0.04
PTPN13-204ENST00000436978 NRLP54845 237 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 ELOAQ14241 798 aaKnown RBP15.32■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF782Q6ZMW2 699 aaPredicted RBP15.32■□□□□ 0.04
PTPN13-204ENST00000436978 RELL1Q8IUW5 271 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 SMARCD2Q92925 531 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 TBX5Q99593 518 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 PTTG2Q9NZH5 202 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 GNG8Q9UK08 70 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 MID1O15344 667 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 C5AR1P21730 350 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 GRIA1P42261 906 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 LIN52Q52LA3 116 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 SLC39A5Q6ZMH5 540 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 KHNYNO15037 678 aaKnown RBP15.32■□□□□ 0.04
PTPN13-204ENST00000436978 C6orf47O95873 294 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 C8BP07358 591 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 FOXN2P32314 431 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 TUBA1BP68363 451 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 TUBA4AP68366 448 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 TUBA1AQ71U36 451 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 ZSCAN4Q8NAM6 433 aaPredicted RBP15.32■□□□□ 0.04
PTPN13-204ENST00000436978 SMG8Q8ND04 991 aaKnown RBP15.32■□□□□ 0.04
PTPN13-204ENST00000436978 MMABQ96EY8 250 aaPredicted RBP15.32■□□□□ 0.04
PTPN13-204ENST00000436978 SLC22A4Q9H015 551 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 MKS1Q9NXB0 559 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 ARFRP1Q13795 201 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 DGLUCYQ7Z3D6 616 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 GALPQ9UBC7 116 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 OAZ3Q9UMX2 235 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 HTR1AP08908 422 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 G6PDP11413 515 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 CD36P16671 472 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 DSG2Q14126 1118 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 TXNRD3NBQ6F5E7 133 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 TSPEARQ8WU66 669 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 STON2Q8WXE9 905 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 ALPK1Q96QP1 1244 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 ITPAQ9BY32 194 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 WASF3Q9UPY6 502 aa15.32■□□□□ 0.04
PTPN13-204ENST00000436978 RNGTTO60942 597 aaKnown RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 F8A1P23610 371 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 LEPRP48357 1165 aaKnown RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 CYBRD1Q53TN4 286 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 TPRG1LQ5T0D9 272 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 SNIP1Q8TAD8 396 aaKnown RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 DDX1Q92499 740 aaKnown RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 TMEM80Q96HE8 168 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 RMI1Q9H9A7 625 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 TPT1P8Q9HAU6 139 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 PCDH10Q9P2E7 1040 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 B4GALT6Q9UBX8 382 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 MGAT4BQ9UQ53 548 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 C14orf166Q9Y224 244 aaKnown RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 HYKKA2RU49 373 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 L7N2F9 121 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 ARL6IP5O75915 188 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 VAMP2P63027 116 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 MR1Q95460 341 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 TMBIM1Q969X1 311 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 TAF1P21675 1872 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 ACOX3O15254 700 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF217O75362 1048 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 SCGNO76038 276 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 PSKH1P11801 424 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 TYRP1P17643 537 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 ETV3P41162 512 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 TMEM35AQ53FP2 167 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 RBM20Q5T481 1227 aaKnown RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 FOXJ1Q92949 421 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 HERPUD2Q9BSE4 406 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 PCDHAC1Q9H158 963 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 HOXD13P35453 343 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 RABIFP47224 123 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 PER3P56645 1201 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 ARPC4P59998 168 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 NOXRED1Q6NXP6 359 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 PQLC3Q8N755 202 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 OR8J3Q8NGG0 315 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 CENPMQ9NSP4 180 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 ZFR2Q9UPR6 939 aaKnown RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 HCKP08631 526 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 GDI2P50395 445 aaKnown RBP15.31■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF101Q8IZC7 436 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 SLC44A3Q8N4M1 653 aa15.31■□□□□ 0.04
PTPN13-204ENST00000436978 OR56A3Q8NH54 315 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms