RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TPP2P29144 1249 aaPredicted RBP21.89■■□□□ 1.1
CPSF4-204ENST00000436336 PRDX6P30041 224 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 SSR2P43308 183 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 UFM1P61960 85 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 AGKQ53H12 422 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 TCTE1Q5JU00 501 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 CCDC121Q6ZUS5 278 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 PROKR1Q8TCW9 393 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 UTP15Q8TED0 518 aaKnown RBP21.89■■□□□ 1.1
CPSF4-204ENST00000436336 N4BP2L2Q92802 583 aaPredicted RBP21.89■■□□□ 1.1
CPSF4-204ENST00000436336 TUBB6Q9BUF5 446 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 ACTL8Q9H568 366 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 DDX31Q9H8H2 851 aaKnown RBP21.89■■□□□ 1.1
CPSF4-204ENST00000436336 PRDM7Q9NQW5 492 aa21.89■■□□□ 1.1
CPSF4-204ENST00000436336 C4orf51C9J302 202 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 SMIM10L1P0DMW3 83 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 JAK1P23458 1154 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 ASMTP46597 345 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 CLDN8P56748 225 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 ZNF763Q0D2J5 394 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 ILKQ13418 452 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 MAPRE2Q15555 327 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 CCNYL2Q5T2Q4 361 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 TMEM214Q6NUQ4 689 aaKnown RBP21.89■■□□□ 1.09
CPSF4-204ENST00000436336 ABHD13Q7L211 337 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 SLITRK4Q8IW52 837 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 OR9I1Q8NGQ6 314 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 CMTM5Q96DZ9 223 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 SMIM10Q96HG1 83 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 CCDC74BQ96LY2 380 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 TSSK3Q96PN8 268 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 DPY30Q9C005 99 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 ARL8BQ9NVJ2 186 aa21.89■■□□□ 1.09
CPSF4-204ENST00000436336 ARHGAP10A1A4S6 786 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 EEDO75530 441 aaKnown RBP21.88■■□□□ 1.09
CPSF4-204ENST00000436336 GBAP04062 536 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 ZNF888P0CJ79 500 aaPredicted RBP21.88■■□□□ 1.09
CPSF4-204ENST00000436336 RAB8AP61006 207 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 TRA2AQ13595 282 aaKnown RBP eCLIP21.88■■□□□ 1.09
CPSF4-204ENST00000436336 KCNAB1Q14722 419 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 HERC3Q15034 1050 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 PRTGQ2VWP7 1150 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 FUNDC1Q8IVP5 155 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 RP9Q8TA86 221 aaKnown RBP21.88■■□□□ 1.09
CPSF4-204ENST00000436336 NSL1Q96IY1 281 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 TMEM74Q96NL1 305 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 TEFMQ96QE5 360 aaKnown RBP21.88■■□□□ 1.09
CPSF4-204ENST00000436336 ROGDIQ9GZN7 287 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 ENAMQ9NRM1 1142 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 TAGLN3Q9UI15 199 aa21.88■■□□□ 1.09
CPSF4-204ENST00000436336 A0A0G2JN53 185 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 GSTM5P46439 218 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 BNIP1Q12981 228 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 ZNF793Q6ZN11 406 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 DGLUCYQ7Z3D6 616 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 PIP4P1Q86T03 277 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 GLB1L3Q8NCI6 653 aaPredicted RBP21.87■■□□□ 1.09
CPSF4-204ENST00000436336 CLHC1Q8NHS4 586 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 ZCCHC10Q8TBK6 192 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 EGLN2Q96KS0 407 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 TEX37Q96LM6 180 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 COPS7BQ9H9Q2 264 aaPredicted RBP21.87■■□□□ 1.09
CPSF4-204ENST00000436336 STARD5Q9NSY2 213 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 MAPRE3Q9UPY8 281 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 SLC22A7Q9Y694 548 aa21.87■■□□□ 1.09
CPSF4-204ENST00000436336 A0A088AWK7 358 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 A0A0A6YYD5 115 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 ERICH4A6NGS2 130 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 PRMT3O60678 531 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 KLHL18O94889 574 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 SCELO95171 688 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 CBX6O95503 412 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 CTSBP07858 339 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 COX4I1P13073 169 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 ALOX12P18054 663 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 ZNF10P21506 573 aaPredicted RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 HIST1H1TP22492 207 aaPredicted RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 ATP5A1P25705 553 aaKnown RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 GK5Q6ZS86 529 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 YTHDF3Q7Z739 585 aaKnown RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 ZCCHC7Q8N3Z6 543 aaKnown RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 C16orf78Q8WTQ4 265 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 ZBTB18Q99592 522 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 MYNNQ9NPC7 610 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 WBP11Q9Y2W2 641 aaKnown RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 WDR87Q6ZQQ6 2873 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 FAM234BA2RU67 622 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 RFPL3O75679 317 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 FOLR1P15328 257 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 CD1EP15812 388 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 PRPS1L1P21108 318 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 CALB2P22676 271 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 POLR2JP52435 117 aaKnown RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 MAPK12P53778 367 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 CLNS1AP54105 237 aaKnown RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 TRA2BP62995 288 aaKnown RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 E2F1Q01094 437 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 CYLC2Q14093 348 aaPredicted RBP21.86■■□□□ 1.09
CPSF4-204ENST00000436336 GPR19Q15760 415 aa21.86■■□□□ 1.09
CPSF4-204ENST00000436336 BLOC1S3Q6QNY0 202 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms