RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 NDC80O14777 642 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 PRMT3O60678 531 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 SLC19A2O60779 497 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 WDR47O94967 919 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 PRF1P14222 555 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 CD46P15529 392 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 GRNP28799 593 aaKnown RBP20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 GDF5P43026 501 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 RBPJQ06330 500 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 ZNF468Q5VIY5 522 aaPredicted RBP20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 FRA10AC1Q70Z53 315 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 TRPV3Q8NET8 790 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 ELP5Q8TE02 316 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 CREB3L4Q8TEY5 395 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 FRMD6Q96NE9 622 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 OARD1Q9Y530 152 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 PCDHGB6Q9Y5F9 930 aa20.45■□□□□ 0.86
RPUSD3-206ENST00000433535 EFCAB8A8MWE9 144 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 E7ESA3 106 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 HNRNPRO43390 633 aaKnown RBP20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 NEURL1O76050 574 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 RNH1P13489 461 aaKnown RBP20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 RPL21P46778 160 aaKnown RBP20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 MRPS25P82663 173 aaKnown RBP20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 CDKL1Q00532 357 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 ALDH6A1Q02252 535 aaKnown RBP20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 SP5Q6BEB4 398 aaPredicted RBP20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 GALNTL5Q7Z4T8 443 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 ZBED8Q8IZ13 594 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 LGI4Q8N135 537 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 TMEM178AQ8NBL3 297 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 ANKRD7Q92527 254 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 VPS39Q96JC1 886 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 RHOJQ9H4E5 214 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 GPAMQ9HCL2 828 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 NECTIN3Q9NQS3 549 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 SMYD2Q9NRG4 433 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 LRFN1Q9P244 771 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 CTNNAL1Q9UBT7 734 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 TINAGQ9UJW2 476 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 SNX24Q9Y343 169 aa20.44■□□□□ 0.86
RPUSD3-206ENST00000433535 IGKV3D-11A0A0A0MRZ8 115 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 A0A0G2JN53 185 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 TCRBV16S1A1N1A0A5B0 115 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 ASPDHA6ND91 283 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 URADA6NGE7 173 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 NCF1BA6NI72 391 aaPredicted RBP20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 SAGE2PA6NJ88 616 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 A8MUA0 341 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 NCF1CA8MVU1 366 aaPredicted RBP20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 CCDC188H7C350 402 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 PSMD12O00232 456 aaPredicted RBP20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 SERPINA6P08185 405 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 SMIM10L1P0DMW3 83 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 NCF1P14598 390 aaPredicted RBP20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 TPP2P29144 1249 aaPredicted RBP20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 C3AR1Q16581 482 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 MRGPRGQ86SM5 289 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 ADAMTSL2Q86TH1 951 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 RPS19BP1Q86WX3 136 aaKnown RBP20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 SRRM1Q8IYB3 904 aaKnown RBP20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 CA13Q8N1Q1 262 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 SMIM10Q96HG1 83 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 MAGED4Q96JG8 741 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 GPR137Q96N19 417 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 KRT12Q99456 494 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 CAB39LQ9H9S4 337 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 PRDM9Q9NQV7 894 aa20.43■□□□□ 0.86
RPUSD3-206ENST00000433535 NPIPA5E9PKD4 350 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 SLC25A12O75746 678 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 SLC6A12P48065 614 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 HNMTP50135 292 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 SLBPQ14493 270 aaKnown RBP eCLIP20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 SYT10Q6XYQ8 523 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 SLCO4C1Q6ZQN7 724 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 SPATA6LQ8N4H0 392 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 CCT6BQ92526 530 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 RHBDF1Q96CC6 855 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 MCMBPQ9BTE3 642 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 NPIPA1Q9UND3 350 aa20.42■□□□□ 0.86
RPUSD3-206ENST00000433535 ZNHIT1O43257 154 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 SP1P08047 785 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 C1GALT1C1LP0DN25 315 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 GNAZP19086 355 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 HNRNPH1P31943 449 aaKnown RBP20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 CASP6P55212 293 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 BTN3A2P78410 334 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 ART3Q13508 389 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 MAPKAPK3Q16644 382 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 FBXO48Q5FWF7 155 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 SLC25A25Q6KCM7 469 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 ZNF227Q86WZ6 799 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 ZNF808Q8N4W9 903 aaPredicted RBP20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 HORMAD2Q8N7B1 307 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 NFAM1Q8NET5 270 aaPredicted RBP20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 THAP3Q8WTV1 239 aaPredicted RBP20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 GAL3ST3Q96A11 431 aa20.41■□□□□ 0.86
RPUSD3-206ENST00000433535 TMEM79Q9BSE2 394 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms