RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 RNF11Q9Y3C5 154 aa13.59□□□□□ -0.23
LAMA4-208ENST00000431543 HEATR5BQ9P2D3 2071 aa13.59□□□□□ -0.23
LAMA4-208ENST00000431543 CCDC88CQ9P219 2028 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 FITM1A5D6W6 292 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 TRPC5OSA6NMA1 111 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 PPP6CO00743 305 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 UBFD1O14562 309 aaKnown RBP13.58□□□□□ -0.24
LAMA4-208ENST00000431543 ULK1O75385 1050 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 OR4F21O95013 312 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 TGDSO95455 350 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 STATHP02808 62 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 RAB40ALP0C0E4 278 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 KITP10721 976 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 EPORP19235 508 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 AGXTP21549 392 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 GSTM2P28161 218 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 SERPINB1P30740 379 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 CCR10P46092 362 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 SNRPNP63162 240 aaKnown RBP13.58□□□□□ -0.24
LAMA4-208ENST00000431543 DCDP81605 110 aaKnown RBP13.58□□□□□ -0.24
LAMA4-208ENST00000431543 MC1RQ01726 317 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 ZNF33BQ06732 778 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 RBBP5Q15291 538 aaKnown RBP13.58□□□□□ -0.24
LAMA4-208ENST00000431543 CPSF6Q16630 551 aaKnown RBP eCLIP13.58□□□□□ -0.24
LAMA4-208ENST00000431543 NKAIN1Q4KMZ8 207 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 CATSPEREQ5SY80 951 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 GRHL2Q6ISB3 625 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 BORAQ6PGQ7 559 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 LRRC34Q8IZ02 419 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 METTL27Q8N6F8 245 aaPredicted RBP13.58□□□□□ -0.24
LAMA4-208ENST00000431543 ZNF781Q8N8C0 355 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 CDYL2Q8N8U2 506 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 TTLQ8NG68 377 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 OR4K1Q8NGD4 311 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 AGR3Q8TD06 166 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 WBP1Q96G27 269 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 SEC16BQ96JE7 1060 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 OR2A5Q96R48 311 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 SORT1Q99523 831 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 ARHGAP9Q9BRR9 750 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 EPN3Q9H201 632 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 NT5DC2Q9H857 520 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 ZNF395Q9H8N7 513 aaPredicted RBP13.58□□□□□ -0.24
LAMA4-208ENST00000431543 SLCO1B3Q9NPD5 702 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 ENAMQ9NRM1 1142 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 CUTCQ9NTM9 273 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 TXLNGQ9NUQ3 528 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 NMRK1Q9NWW6 199 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 NDOR1Q9UHB4 597 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 ZDHHC2Q9UIJ5 367 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 HAO1Q9UJM8 370 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 TCFL5Q9UL49 500 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 CFAP46Q8IYW2 2715 aa13.58□□□□□ -0.24
LAMA4-208ENST00000431543 FEZF1A0PJY2 475 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 HYKKA2RU49 373 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 ANKDD1BA6NHY2 528 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 H0YIV9 168 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 HDAC3O15379 428 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 KLF7O75840 302 aaPredicted RBP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 C1QL1O75973 258 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 VARSP26640 1264 aaKnown RBP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 OR1D4P47884 311 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 RELAQ04206 551 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 TRAF3Q13114 568 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 SLBPQ14493 270 aaKnown RBP eCLIP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 GRM7Q14831 915 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 NCF4Q15080 339 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 ZRSR2Q15696 482 aaKnown RBP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 HKDC1Q2TB90 917 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 PRTGQ2VWP7 1150 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 CRTC2Q53ET0 693 aaPredicted RBP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 TCTE1Q5JU00 501 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 LETMD1Q6P1Q0 360 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 TMIGD1Q6UXZ0 262 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 THAP11Q96EK4 314 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 ZNF317Q96PQ6 595 aaPredicted RBP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 MACROD1Q9BQ69 325 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 DPH2Q9BQC3 489 aaPredicted RBP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 C20orf27Q9GZN8 174 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 FGFR1OP2Q9NVK5 253 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 PNPOQ9NVS9 261 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 GEMIN8Q9NWZ8 242 aaKnown RBP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 IFT80Q9P2H3 777 aaPredicted RBP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 SRPK3Q9UPE1 567 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 FIS1Q9Y3D6 152 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 MAU2Q9Y6X3 613 aa13.57□□□□□ -0.24
LAMA4-208ENST00000431543 MDC1Q14676 2089 aaKnown RBP13.57□□□□□ -0.24
LAMA4-208ENST00000431543 TRBC2A0A5B9 178 aa13.56□□□□□ -0.24
LAMA4-208ENST00000431543 SLC28A1O00337 649 aa13.56□□□□□ -0.24
LAMA4-208ENST00000431543 DSCR3O14972 297 aa13.56□□□□□ -0.24
LAMA4-208ENST00000431543 OR1F1O43749 312 aa13.56□□□□□ -0.24
LAMA4-208ENST00000431543 LCMT2O60294 686 aaKnown RBP13.56□□□□□ -0.24
LAMA4-208ENST00000431543 SHOX2O60902 331 aaPredicted RBP13.56□□□□□ -0.24
LAMA4-208ENST00000431543 VPS4BO75351 444 aa13.56□□□□□ -0.24
LAMA4-208ENST00000431543 PCNAP12004 261 aa13.56□□□□□ -0.24
LAMA4-208ENST00000431543 EZRP15311 586 aaKnown RBP13.56□□□□□ -0.24
LAMA4-208ENST00000431543 SEC24CP53992 1094 aa13.56□□□□□ -0.24
LAMA4-208ENST00000431543 ARSFP54793 590 aa13.56□□□□□ -0.24
LAMA4-208ENST00000431543 RPS15AP62244 130 aaKnown RBP13.56□□□□□ -0.24
LAMA4-208ENST00000431543 CSNK1G2P78368 415 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms