RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ZNF789Q5FWF6 425 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 MKRN2Q9H000 416 aaKnown RBP12.44□□□□□ -0.42
PTCH1-207ENST00000429896 GMPPBQ9Y5P6 360 aa12.44□□□□□ -0.42
PTCH1-207ENST00000429896 DBIP07108 87 aaKnown RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 EFNA1P20827 205 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 FUT4P22083 530 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 HK3P52790 923 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 DGUOKQ16854 277 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 SPANXN2Q5MJ10 180 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 ERICH5Q6P6B1 374 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 CYP4V2Q6ZWL3 525 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 BHLHA9Q7RTU4 235 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 COX18Q8N8Q8 333 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 SMPDL3BQ92485 455 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 C1QTNF1Q9BXJ1 281 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 STOX2Q9P2F5 926 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 IFT80Q9P2H3 777 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 FEZF1A0PJY2 475 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 MAGEB17A8MXT2 336 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 ITM2AO43736 263 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 NOS1APO75052 506 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 IGFALSP35858 605 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 RPS15P62841 145 aaKnown RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 PCLAFQ15004 111 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 OR4D1Q15615 310 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 RPE65Q16518 533 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 RFLNAQ6ZTI6 216 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 RASGEF1AQ8N9B8 481 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 RNF31Q96EP0 1072 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 ZFRQ96KR1 1074 aaKnown RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 RTKNQ9BST9 563 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 CLN6Q9NWW5 311 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 KLHL42Q9P2K6 505 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 CST1P01037 141 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 NR2F6P10588 404 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 ARSFP54793 590 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 KRR1Q13601 381 aaKnown RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 ATG14Q6ZNE5 492 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 C8orf59Q8N0T1 100 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 PRRX2Q99811 253 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 LGR4Q9BXB1 951 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 MS4A12Q9NXJ0 267 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 COQ9O75208 318 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 CISD3P0C7P0 127 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 CD9P21926 228 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 OC90Q02509 493 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 TRIM73Q86UV7 250 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 PHF10Q8WUB8 498 aaKnown RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 ZNF282Q9UDV7 671 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 C17orf113A0A1B0GUU1 675 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 TRIM38O00635 465 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 CNR2P34972 360 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 KCNC1P48547 511 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 MTTPP55157 894 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 GALNT7Q86SF2 657 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 GPR151Q8TDV0 419 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 FCRL4Q96PJ5 515 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 KCNC2Q96PR1 638 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 MBNL1Q9NR56 388 aaKnown RBP12.43□□□□□ -0.42
PTCH1-207ENST00000429896 PRTFDC1Q9NRG1 225 aa12.43□□□□□ -0.42
PTCH1-207ENST00000429896 E7EQ34 232 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 CAPN5O15484 640 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-207ENST00000429896 CCKBRP32239 447 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 TTLL10Q6ZVT0 673 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 ANKRD46Q86W74 232 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 C1orf210Q8IVY1 113 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 ADAP2Q9NPF8 381 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 GPR39O43194 453 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 GABRG2P18507 467 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 MED22Q15528 200 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 TYSND1Q2T9J0 566 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 RPS27LQ71UM5 84 aaKnown RBP12.42□□□□□ -0.42
PTCH1-207ENST00000429896 CADM2Q8N3J6 435 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 SLC47A1Q96FL8 570 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 ZFYVE21Q9BQ24 234 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 UBAP1Q9NZ09 502 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 PLCL2Q9UPR0 1127 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 GNB5O14775 395 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 RSL1D1O76021 490 aaKnown RBP12.42□□□□□ -0.42
PTCH1-207ENST00000429896 ALOX5P09917 674 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 SMIM11AP58511 58 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 FAM174BQ3ZCQ3 159 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 KCT2Q8NC54 265 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 NDUFA13Q9P0J0 144 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 TAF4O00268 1085 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 PRODHO43272 600 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 SUV39H1O43463 412 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 ARHGEF15O94989 841 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 SLC16A8O95907 504 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 ATP5A1P25705 553 aaKnown RBP12.42□□□□□ -0.42
PTCH1-207ENST00000429896 CCR7P32248 378 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 PCDH1Q08174 1060 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 OR2T12Q8NG77 320 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 PSMA8Q8TAA3 256 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 C9orf16Q9BUW7 83 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 ZDHHC2Q9UIJ5 367 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 FAM234BA2RU67 622 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 C9JVG2 144 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 TNFRSF10CO14798 259 aa12.42□□□□□ -0.42
PTCH1-207ENST00000429896 CLNKQ7Z7G1 428 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms