RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 CDKL4Q5MAI5 379 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM139Q8IV31 216 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 DCUN1D3Q8IWE4 304 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 NLGN4XQ8N0W4 816 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 C12orf76Q8N812 135 aaPredicted RBP14.89□□□□□ -0.03
PTPRF-206ENST00000429895 OR6N2Q8NGY6 317 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 STRA6Q9BX79 667 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 DMAC2Q9NW81 257 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 NUP50Q9UKX7 468 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 PAK4O96013 591 aaPredicted RBP14.89□□□□□ -0.03
PTPRF-206ENST00000429895 PLP2Q04941 152 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 GRIK2Q13002 908 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 FLYWCH1Q4VC44 716 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF641Q96N77 438 aaPredicted RBP14.89□□□□□ -0.03
PTPRF-206ENST00000429895 P2RY13Q9BPV8 354 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 POLDIP3Q9BY77 421 aaKnown RBP14.89□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM5Q9Y2B1 443 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 FER1L4A9Z1Z3 1794 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 OR6C74A6NCV1 312 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 CHRM1P11229 460 aaPredicted RBP14.89□□□□□ -0.03
PTPRF-206ENST00000429895 BCKDHAP12694 445 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 PRKACGP22612 351 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 TPTEP56180 551 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 PMS2P3Q13401 168 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 ASB12Q8WXK4 309 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 PYURFQ96I23 114 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 RBP7Q96R05 134 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 DNAJC27Q9NZQ0 273 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 A0A1W2PP55 124 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 DLX3O60479 287 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 LEFTY1O75610 366 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 SLC29A3Q9BZD2 475 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 ZIM2Q9NZV7 527 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 MLXQ9UH92 298 aa14.89□□□□□ -0.03
PTPRF-206ENST00000429895 KCNJ13O60928 360 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 ETV3P41162 512 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 OR1E2P47887 323 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 CD83Q01151 205 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF542PQ5EBM4 170 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 NPAS3Q8IXF0 933 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 POGLUT1Q8NBL1 392 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 CASTOR1Q8WTX7 329 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 OR1F2PQ96R84 312 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 GPR174Q9BXC1 333 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 NSUN3Q9H649 340 aaKnown RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 WDR45Q9Y484 360 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 LOC100130705A0A1B0GUX0 176 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 H6PDO95479 791 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 EDNRBP24530 442 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 SLC6A6P31641 620 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 RAB12Q6IQ22 244 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 UBQLNLQ8IYU4 475 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 CCDC116Q8IYX3 515 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 FAM86B1Q8N7N1 296 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 OR4K1Q8NGD4 311 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 THAP6Q8TBB0 222 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 TLCD1Q96CP7 247 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 PTCHD1Q96NR3 888 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM165Q9HC07 324 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 ATXN7L1Q9ULK2 861 aaPredicted RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 DLGAP4Q9Y2H0 992 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 HCRTR2O43614 444 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 ATF4P18848 351 aaPredicted RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 S100A2P29034 98 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 SNU13P55769 128 aaKnown RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 EIF5AP63241 154 aaKnown RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 ITPAQ9BY32 194 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 TPT1P8Q9HAU6 139 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 GIMAP2Q9UG22 337 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 C2orf74A8MZ97 194 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 SLC22A2O15244 555 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 POU6F2P78424 691 aaPredicted RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 OGDHQ02218 1023 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 C10orf82Q8WW14 230 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 NARSO43776 548 aaKnown RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 XRCC1P18887 633 aaPredicted RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 GABRA3P34903 492 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 SHKBP1Q8TBC3 707 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM121BQ9BXQ6 578 aaPredicted RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF395Q9H8N7 513 aaPredicted RBP14.88□□□□□ -0.03
PTPRF-206ENST00000429895 ASB6Q9NWX5 421 aa14.88□□□□□ -0.03
PTPRF-206ENST00000429895 CIB4A0PJX0 185 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 DNM1LO00429 736 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 FBLP22087 321 aaKnown RBP14.87□□□□□ -0.03
PTPRF-206ENST00000429895 GRK1Q15835 563 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 CPNE2Q96FN4 548 aaPredicted RBP14.87□□□□□ -0.03
PTPRF-206ENST00000429895 ZDHHC12Q96GR4 267 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 FUZQ9BT04 418 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 BEX2Q9BXY8 128 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 CD244Q9BZW8 370 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 BEX1Q9HBH7 125 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 TMED5Q9Y3A6 229 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 ADGRB1O14514 1584 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 AURKAO14965 403 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 SOD2P04179 222 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 SOX2P48431 317 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 AGTR2P50052 363 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 CDH15P55291 814 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms