RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 YBX2Q9Y2T7 364 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 GPR39O43194 453 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 MYL9P24844 172 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 FOXN2P32314 431 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 HSF5Q4G112 596 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 ARMC3Q5W041 872 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 FRMD7Q6ZUT3 714 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 SLC30A8Q8IWU4 369 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 CBARPQ8N350 705 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 OSBPL7Q9BZF2 842 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 PPP4R1LQ9P1A2 415 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 PLCL2Q9UPR0 1127 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 A0A087WXM4 84 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 P04436 131 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 ADAM17P78536 824 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 FCHO2Q0JRZ9 810 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 ZNF572Q7Z3I7 529 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 RNF130Q86XS8 419 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 FAM160A2Q8N612 972 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 DIO2Q92813 273 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 TRIM2Q9C040 744 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 ZIM2Q9NZV7 527 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 NPIPA5E9PKD4 350 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 PTNP21246 168 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 SLC6A9P48067 706 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CLEC12AQ5QGZ9 265 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 OR9I1Q8NGQ6 314 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 SLC22A8Q8TCC7 542 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 LRRC3Q9BY71 257 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 TMEM168Q9H0V1 697 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 MUC13Q9H3R2 512 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CKLFQ9UBR5 152 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 NPIPA1Q9UND3 350 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 HS3ST2Q9Y278 367 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 SRRM3A6NNA2 597 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CENPXA8MT69 81 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 M0QX08 132 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 NELFEP18615 380 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CCNOP22674 350 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 LSM3P62310 102 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 NAIF1Q69YI7 327 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 FAM109BQ6ICB4 259 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CCDC103Q8IW40 242 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 GPR65Q8IYL9 337 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 OR52E1Q8NGJ3 308 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 ZNF382Q96SR6 550 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CGREF1Q99674 301 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 RNPEPL1Q9HAU8 725 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 BRD7Q9NPI1 651 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 FAM120CQ9NX05 1096 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 PDE10AQ9Y233 779 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 ZBTB11O95625 1053 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CBLP22681 906 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 MAZP56270 477 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 MAPK14Q16539 360 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 RAET1LQ5VY80 246 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 RINLQ6ZS11 566 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CXXC5Q7LFL8 322 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CLEC1AQ8NC01 280 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 HUS1BQ8NHY5 278 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 NMD3Q96D46 503 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 ZNF717Q9BY31 904 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 CENPMQ9NSP4 180 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 TLR4O00206 839 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 GSC2O15499 205 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 PVRP15151 417 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 ELF3P78545 371 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 DYNC1I2Q13409 638 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 NDUFAF6Q330K2 333 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 PKDCCQ504Y2 493 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 RBM12BQ8IXT5 1001 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 ARFGAP1Q8N6T3 406 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 SLC39A3Q9BRY0 314 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 B3GAT2Q9NPZ5 323 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 HEMK1Q9Y5R4 338 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 TPMTP51580 245 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 SLC5A9Q2M3M2 681 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 TMPRSS11AQ6ZMR5 421 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 NANOGNBQ7Z5D8 188 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 PPP1R3BQ86XI6 285 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 MAP3K3Q99759 626 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 NUAK2Q9H093 628 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 BATF3Q9NR55 127 aa16.43■□□□□ 0.22
SMARCA4-203ENST00000429416 BCL10O95999 233 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 F3P13726 295 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 KDELC1Q6UW63 502 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 LHX3Q9UBR4 397 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 C1orf226A1L170 272 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 EMP2P54851 167 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 HYAL1Q12794 435 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 TRAF3Q13114 568 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 C18orf21Q32NC0 220 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 C10orf62Q5T681 223 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 TSSK4Q6SA08 328 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 TMPRSS9Q7Z410 1059 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 PDZD3Q86UT5 571 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 LRRC25Q8N386 305 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 CEP76Q8TAP6 659 aa16.42■□□□□ 0.22
SMARCA4-203ENST00000429416 A0A0J9YY10 115 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms