RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CCNDBP1O95273 360 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 NUDT7P0C024 238 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 LCN1P31025 176 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 RAB5BP61020 215 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 LRFN4Q6PJG9 635 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 OR6S1Q8NH40 331 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 PPM1MQ96MI6 270 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 NPAS1Q99742 590 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 TREX2Q9BQ50 279 aaPredicted RBP13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 POPDC3Q9HBV1 291 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 CMTM6Q9NX76 183 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 AASSQ9UDR5 926 aa13.93□□□□□ -0.18
SYNGAP1-203ENST00000428982 ACSM4P0C7M7 580 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 RRASP10301 218 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 HLA-EP13747 358 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 CHRM3P20309 590 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 KCNJ5P48544 419 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZNF460Q14592 562 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZBTB6Q15916 424 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 UPP1Q16831 310 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 LRRC66Q68CR7 880 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 GCNT7Q6ZNI0 430 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZNF565Q8N9K5 539 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 GANCQ8TET4 914 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 TEX12Q9BXU0 123 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 AFF4Q9UHB7 1163 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ISM1B1AKI9 464 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 L7N2F9 121 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 MT-CYBP00156 380 aaPredicted RBP13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 RHOQP17081 205 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ATP12AP54707 1039 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 TSTQ16762 297 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZNF691Q5VV52 312 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 KCTD11Q693B1 232 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 C5orf46Q6UWT4 87 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 MON1AQ86VX9 555 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZMIZ2Q8NF64 920 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 OR2T12Q8NG77 320 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 FRS2Q8WU20 508 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 LINC00052Q96N35 136 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 TCEAL7Q9BRU2 100 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 PLAC1Q9HBJ0 212 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 FBRSL1Q9HCM7 1045 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ABCD2Q9UBJ2 740 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ERVK-19Q9WJR5 959 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 KIAA0100Q14667 2235 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 ZNFX1Q9P2E3 1918 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 DISC1C4P0D8 188 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 MAPK1P28482 360 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 RYKP34925 604 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 NNMTP40261 264 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 EPHA5P54756 1037 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 UGT8Q16880 541 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 SDHAF4Q5VUM1 108 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 OXR1Q8N573 874 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 KIAA1958Q8N8K9 716 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 TMIEQ8NEW7 156 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 FUBP3Q96I24 572 aaKnown RBP eCLIP13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 TSNAXQ99598 290 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 EGFL8Q99944 293 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 CRB3Q9BUF7 120 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 LRRC3Q9BY71 257 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 MIOSQ9NXC5 875 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 MARCH2Q9P0N8 246 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 CRYL1Q9Y2S2 319 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 OTOFQ9HC10 1997 aa13.92□□□□□ -0.18
SYNGAP1-203ENST00000428982 TO15178 435 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 TXNL1O43396 289 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 RPP40O75818 363 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 GSRP00390 522 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 CHRM5P08912 532 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 PIK3CBP42338 1070 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 TSPAN5P62079 268 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 DUSP4Q13115 394 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 GPR158Q5T848 1215 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 HFE2Q6ZVN8 426 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 JAZF1Q86VZ6 243 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 HS3ST5Q8IZT8 346 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 LDAHQ9H6V9 325 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 SARS2Q9NP81 518 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 ASH2LQ9UBL3 628 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 CBX4O00257 560 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 PROM1O43490 865 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 ADH1AP07327 375 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 LHCGRP22888 699 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 PTX3P26022 381 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 OLIG2Q13516 323 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 DPY19L1Q2PZI1 675 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 DET1Q7L5Y6 550 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 B3GNT8Q7Z7M8 397 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 OR52N1Q8NH53 320 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 NT5C3BQ969T7 300 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 ITCHQ96J02 903 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 CFHR5Q9BXR6 569 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 MS4A7Q9GZW8 240 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 TRPS1Q9UHF7 1281 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 PCDHB14Q9Y5E9 798 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 IRAK2O43187 625 aa13.91□□□□□ -0.18
SYNGAP1-203ENST00000428982 ARSBP15848 533 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms