RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PTENP60484 403 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 NIPAL4Q0D2K0 466 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 PLD1Q13393 1074 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TMED1Q13445 227 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TRIM29Q14134 588 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TMEM187Q14656 261 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 PON2Q15165 354 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 UGCGQ16739 394 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TCEAL6Q6IPX3 200 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 SLC8B1Q6J4K2 584 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 Q6ZS52 159 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 SH2D5Q6ZV89 423 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 PTOV1Q86YD1 416 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 DDHD1Q8NEL9 900 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 GSDMBQ8TAX9 411 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TCEAL3Q969E4 200 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TBATAQ96M53 351 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 NFKBIZQ9BYH8 718 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 UNC45AQ9H3U1 944 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZHX3Q9H4I2 956 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 DHX33Q9H6R0 707 aaKnown RBP4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 MINDY3Q9H8M7 445 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 FGF22Q9HCT0 170 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 C2orf42Q9NWW7 574 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 RCC2Q9P258 522 aaKnown RBP4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 LIMA1Q9UHB6 759 aaKnown RBP4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 KLK13Q9UKR3 277 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 KCNJ14Q9UNX9 436 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 MRPS28Q9Y2Q9 187 aaKnown RBP4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 HES2Q9Y543 173 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 COL4A2P08572 1712 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 KIF26AQ9ULI4 1882 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 A0A087X002 238 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 CASTOR2A6NHX0 329 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 SLC22A2O15244 555 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF217O75362 1048 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 PSMD10O75832 226 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 STBD1O95210 358 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 IGHDP01880 384 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 HIST1H2ABP04908 130 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC159P0C7I6 412 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 ARF4P18085 180 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 HIST1H2ADP20671 130 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 MMP15P51511 669 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCR9P51686 369 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF131P52739 623 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 RWDD2BP57060 319 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 IRX4P78413 519 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 ROR1Q01973 937 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 AKAP17AQ02040 695 aaKnown RBP4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 LRMPQ12912 555 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 SLC1A5Q15758 541 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 TBCEQ15813 527 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 MAPK6Q16659 721 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 ITPRIPL2Q3MIP1 535 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 DNAJC21Q5F1R6 531 aaKnown RBP4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 SPDYCQ5MJ68 293 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 FFAR4Q5NUL3 377 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 HIST3H2AQ7L7L0 130 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 RABEPKQ7Z6M1 372 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 ARID3BQ8IVW6 561 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 ARHGAP12Q8IWW6 846 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 C4orf19Q8IY42 314 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 CHCHD4Q8N4Q1 142 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC148Q8NFR7 591 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 TMEM143Q96AN5 459 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 TCEAL4Q96EI5 215 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 CPB2Q96IY4 423 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 GFI1Q99684 422 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 SH3GL3Q99963 347 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 ADPGKQ9BRR6 497 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 SEMA6AQ9H2E6 1030 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 NXF3Q9H4D5 531 aaKnown RBP4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 SIX2Q9NPC8 291 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 PRMT7Q9NVM4 692 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 GTSE1Q9NYZ3 720 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 RNF215Q9Y6U7 377 aa4.34□□□□□ -1.71
HMGB3P5-201ENST00000428894 KNTC1P50748 2209 aa4.34□□□□□ -1.72
HMGB3P5-201ENST00000428894 CACNA1EQ15878 2313 aa4.34□□□□□ -1.72
HMGB3P5-201ENST00000428894 GOLGA4Q13439 2230 aaKnown RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 CEP192Q8TEP8 1941 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 PLXNB3Q9ULL4 1909 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 NUP210Q8TEM1 1887 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 STK36Q9NRP7 1315 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 TEX13DA0A0J9YY54 714 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 A0A1B0GVY2 172 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 TMEM150BA6NC51 233 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 MAGEB17A8MXT2 336 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 J3QR06 171 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 TRDMT1O14717 391 aaKnown RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 SMAD9O15198 467 aaKnown RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 KIAA0754O94854 1291 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 AGR2O95994 175 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 PLA2G4BP0C869 781 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 LIFP15018 202 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 EPHA2P29317 976 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 MARCKSP29966 332 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 YWHABP31946 246 aaKnown RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 MAN1A1P33908 653 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 CCR2P41597 374 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms