RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TRBV11-1A0A0K0K1C0 115 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 FGGP02679 453 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 CD99P14209 185 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 NPPBP16860 134 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 RGS4P49798 205 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 RGS1Q08116 209 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 PMPCAQ10713 525 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 GPS1Q13098 491 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 MYBPHQ13203 477 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 PWP1Q13610 501 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 ANKRD22Q5VYY1 191 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 CES4AQ5XG92 561 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 LRRC8EQ6NSJ5 796 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 NIPAL1Q6NVV3 410 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 ABHD13Q7L211 337 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 TMEM156Q8N614 296 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 NFAM1Q8NET5 270 aaPredicted RBP17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 C16orf52Q8NHV5 167 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 MAIP1Q8WWC4 291 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 NRGNQ92686 78 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 SEC16BQ96JE7 1060 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 AARSD1Q9BTE6 412 aaKnown RBP17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 RHBGQ9H310 441 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 KCNN3Q9UGI6 736 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 FBXO5Q9UKT4 447 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 FBXW2Q9UKT8 454 aa17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 ZNF469Q96JG9 3925 aaPredicted RBP17.1■□□□□ 0.33
UPK3BP1-201ENST00000428678 ZCWPW2A0A1B0GU75 182 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 TCRBV16S1A1N1A0A5B0 115 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 TRBC2A0A5B9 178 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 MAGEB16A2A368 324 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 SDR42E2A6NKP2 422 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 PSMD12O00232 456 aaPredicted RBP17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 HAUS5O94927 633 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 RNH1P13489 461 aaKnown RBP17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 DNAJA1P31689 397 aaKnown RBP17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 HYAL2Q12891 473 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 SP140Q13342 867 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 UGT3A1Q6NUS8 523 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 MDGA2Q7Z553 956 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 MYO1HQ8N1T3 1032 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 ZFP62Q8NB50 900 aaPredicted RBP17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 ARMC2Q8NEN0 867 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 ABHD11Q8NFV4 315 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 OR52N2Q8NGI0 321 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 CALML6Q8TD86 181 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 PYCR2Q96C36 320 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 DEFB127Q9H1M4 99 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 NECTIN3Q9NQS3 549 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 PRDM9Q9NQV7 894 aa17.09■□□□□ 0.33
UPK3BP1-201ENST00000428678 GOLGA8MH3BSY2 632 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 ITGA10O75578 1167 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 ZWINTO95229 277 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 HOXD4P09016 255 aaPredicted RBP17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 HIST1H2AGP0C0S8 130 aaPredicted RBP17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 HIST1H2ADP20671 130 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 HNF4AP41235 474 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 MAGEA6P43360 314 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 CLCN2P51788 898 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 NUP107P57740 925 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 RAB8AP61006 207 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 DHX9Q08211 1270 aaKnown RBP17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 PHKG1Q16816 387 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 LMNTD2Q8IXW0 634 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 ARMC10Q8N2F6 343 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 OR4K1Q8NGD4 311 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 OR5M3Q8NGP4 307 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 NT5CQ8TCD5 201 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 UTP15Q8TED0 518 aaKnown RBP17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 SNF8Q96H20 258 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 HIST1H2AHQ96KK5 128 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 NDNQ99608 321 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 HIST1H2AJQ99878 128 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 H2AFJQ9BTM1 129 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 SARGQ9BW04 601 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 PLSCR2Q9NRY7 297 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 ZFATQ9P243 1243 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 MAD1L1Q9Y6D9 718 aa17.08■□□□□ 0.32
UPK3BP1-201ENST00000428678 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 IGKV3D-11A0A0A0MRZ8 115 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 PABPN1LA6NDY0 278 aaKnown RBP17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 SLC16A5O15375 505 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 MYO1DO94832 1006 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 NR0B1P51843 470 aaKnown RBP17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 IST1P53990 364 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 EMC4Q5J8M3 183 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 CATSPEREQ5SY80 951 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 ACAD11Q709F0 780 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 APCDD1LQ8NCL9 501 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 B3GNT7Q8NFL0 401 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 LINGO1Q96FE5 620 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 FAM167BQ9BTA0 163 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 TMUB1Q9BVT8 246 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 XAB2Q9HCS7 855 aaKnown RBP17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 TIMMDC1Q9NPL8 285 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 ARL15Q9NXU5 204 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 TAS2R13Q9NYV9 303 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 ZFP69BQ9UJL9 534 aa17.07■□□□□ 0.32
UPK3BP1-201ENST00000428678 ERVK-11Q9UQG0 969 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms