RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CLDN16Q9Y5I7 305 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 CACNA1CQ13936 2221 aa14.55□□□□□ -0.08
SEC13-210ENST00000428626 OTOGQ6ZRI0 2925 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 FAM95CA0A1B0GW59 222 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 TCRBV16S1A1N1A0A5B0 115 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 NDC80O14777 642 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 ZSCAN12O43309 604 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 PRAMEF4O60810 478 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 WISP3O95389 354 aaPredicted RBP14.54□□□□□ -0.08
SEC13-210ENST00000428626 TBX6O95947 436 aaPredicted RBP14.54□□□□□ -0.08
SEC13-210ENST00000428626 TPP2P29144 1249 aaPredicted RBP14.54□□□□□ -0.08
SEC13-210ENST00000428626 MRPS25P82663 173 aaKnown RBP14.54□□□□□ -0.08
SEC13-210ENST00000428626 DR1Q01658 176 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 RGS1Q08116 209 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 MGAT5Q09328 741 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 ART3Q13508 389 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 TSNQ15631 228 aaKnown RBP14.54□□□□□ -0.08
SEC13-210ENST00000428626 PRAMEF9Q5VWM5 478 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 QSOX2Q6ZRP7 698 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 RPS19BP1Q86WX3 136 aaKnown RBP14.54□□□□□ -0.08
SEC13-210ENST00000428626 CA13Q8N1Q1 262 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 SLC5A8Q8N695 610 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 FBXO36Q8NEA4 188 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 LRRC39Q96DD0 335 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 GPR137Q96N19 417 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 TRIM31Q9BZY9 425 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 RHBGQ9H310 441 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 ZNF835Q9Y2P0 537 aa14.54□□□□□ -0.08
SEC13-210ENST00000428626 A0A0G2JN53 185 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 A8MUA0 341 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 E7ESA3 106 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 NPIPA5E9PKD4 350 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 TGFBR3LH3BV60 316 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 PRMT3O60678 531 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 SP1P08047 785 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 JAK1P23458 1154 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 EEF1DP29692 281 aaKnown RBP14.53□□□□□ -0.08
SEC13-210ENST00000428626 SLC6A12P48065 614 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 ARL4CP56559 192 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 MLF1P58340 268 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 HSF1Q00613 529 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 OC90Q02509 493 aaPredicted RBP14.53□□□□□ -0.08
SEC13-210ENST00000428626 PDIA2Q13087 525 aaKnown RBP14.53□□□□□ -0.08
SEC13-210ENST00000428626 RUNX2Q13950 521 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 RBBP5Q15291 538 aaKnown RBP14.53□□□□□ -0.08
SEC13-210ENST00000428626 TOR1AIP1Q5JTV8 583 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 ADNP2Q6IQ32 1131 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 SLC25A25Q6KCM7 469 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 SLCO4C1Q6ZQN7 724 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 SYDE1Q6ZW31 735 aaPredicted RBP14.53□□□□□ -0.08
SEC13-210ENST00000428626 ABHD13Q7L211 337 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.53□□□□□ -0.08
SEC13-210ENST00000428626 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.53□□□□□ -0.08
SEC13-210ENST00000428626 CYP4X1Q8N118 509 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 LGI4Q8N135 537 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 TMEM52Q8NDY8 209 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 ADAMTS18Q8TE60 1221 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 THAP3Q8WTV1 239 aaPredicted RBP14.53□□□□□ -0.08
SEC13-210ENST00000428626 AIF1LQ9BQI0 150 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 ZFATQ9P243 1243 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 LRFN1Q9P244 771 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 NPIPA1Q9UND3 350 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 DYRK1BQ9Y463 629 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 OARD1Q9Y530 152 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 POLQO75417 2590 aa14.53□□□□□ -0.08
SEC13-210ENST00000428626 PABPN1LA6NDY0 278 aaKnown RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 SAGE2PA6NJ88 616 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 SERPINA6P08185 405 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 MYBL2P10244 700 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 CD46P15529 392 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 PPP2R1BP30154 601 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 HNRNPH1P31943 449 aaKnown RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 RPL21P46778 160 aaKnown RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 HNRNPFP52597 415 aaKnown RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 CDKL1Q00532 357 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 ALDH6A1Q02252 535 aaKnown RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 FBXO48Q5FWF7 155 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 Q6ZPB1 254 aaPredicted RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 VN1R5Q7Z5H4 357 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 FGD2Q7Z6J4 655 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 MCEMP1Q8IX19 187 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 KLHDC8AQ8IYD2 350 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 SPATA6LQ8N4H0 392 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 ZNF808Q8N4W9 903 aaPredicted RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 NKAPQ8N5F7 415 aaKnown RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 CPSF7Q8N684 471 aaKnown RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 APCDD1LQ8NCL9 501 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 TRPV3Q8NET8 790 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 ANKRD7Q92527 254 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 RHBDF1Q96CC6 855 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 TRIM45Q9H8W5 580 aaPredicted RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 SUCOQ9UBS9 1254 aaKnown RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 ZNF223Q9UK11 482 aaPredicted RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 MTO1Q9Y2Z2 717 aaKnown RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 SNX24Q9Y343 169 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 KLF2Q9Y5W3 355 aaPredicted RBP14.52□□□□□ -0.09
SEC13-210ENST00000428626 KCNE2Q9Y6J6 123 aa14.52□□□□□ -0.09
SEC13-210ENST00000428626 CXorf49A8MYA2 514 aaPredicted RBP14.51□□□□□ -0.09
SEC13-210ENST00000428626 TAPBPO15533 448 aa14.51□□□□□ -0.09
SEC13-210ENST00000428626 NME2P1O60361 137 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms