RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 DEFB133Q30KQ1 61 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 INAVAQ3KP66 663 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 SPANXN4Q5MJ08 99 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 CCNYL2Q5T2Q4 361 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 GARNL3Q5VVW2 1013 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 FCRL6Q6DN72 434 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 MRM1Q6IN84 353 aaKnown RBP8.65□□□□□ -1.02
NR1I3-209ENST00000428574 ADNP2Q6IQ32 1131 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 ABHD17CQ6PCB6 329 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 WDR74Q6RFH5 385 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-209ENST00000428574 ABHD13Q7L211 337 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 PRSS42Q7Z5A4 293 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 VN1R4Q7Z5H5 301 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 DHDDSQ86SQ9 333 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 PLXDC1Q8IUK5 500 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 SAMD14Q8IZD0 417 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-209ENST00000428574 SLC25A45Q8N413 288 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 C19orf47Q8N9M1 422 aaKnown RBP8.65□□□□□ -1.02
NR1I3-209ENST00000428574 TNIP2Q8NFZ5 429 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 GOT1L1Q8NHS2 421 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-209ENST00000428574 C16orf78Q8WTQ4 265 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 PIGKQ92643 395 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 RERGQ96A58 199 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-209ENST00000428574 ZNF285Q96NJ3 590 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 OR52E6Q96RD3 313 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 F2RL3Q96RI0 385 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 CGREF1Q99674 301 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 NPAS2Q99743 824 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 FAIM2Q9BWQ8 316 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 SPATA9Q9BWV2 254 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 MFRPQ9BY79 579 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 OR51B5Q9H339 312 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 OCEL1Q9H607 264 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 TMEM74BQ9NUR3 256 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 MS4A12Q9NXJ0 267 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 CD300AQ9UGN4 299 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 SLC7A8Q9UHI5 535 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 CORO2BQ9UQ03 480 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 SLC22A7Q9Y694 548 aa8.65□□□□□ -1.02
NR1I3-209ENST00000428574 FANCMQ8IYD8 2048 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 TRBV23OR9-2A0A075B6M9 112 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 IGHV1OR21-1A0A087WYE8 117 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 FEZF1A0PJY2 475 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 BLACEA4D250 179 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 GPR37L1O60883 481 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 CTSVO60911 334 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 SCN2BO60939 215 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 FKBP6O75344 327 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 ZBTB11O95625 1053 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 STAMBPO95630 424 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 ABCB1P08183 1280 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 ANKRD34CP0C6C1 535 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 SMIM10L1P0DMW3 83 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 HOXB9P17482 250 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 CDH3P22223 829 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 SLC6A2P23975 617 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 FRKP42685 505 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 DUSP3P51452 185 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 NME5P56597 212 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 YBX1P67809 324 aaKnown RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 TXNL4AP83876 142 aaKnown RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 MAP7Q14244 749 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 SLC9A5Q14940 896 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 MLC1Q15049 377 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 NR0B2Q15466 257 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 HLA-BQ31612 363 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 TCTE1Q5JU00 501 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 PAGE3Q5JUK9 113 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 CPTPQ5TA50 214 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 IRAK1BP1Q5VVH5 260 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 FAM219BQ5XKK7 198 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 FBXO42Q6P3S6 717 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 AAGABQ6PD74 315 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 DLEU7Q6UYE1 221 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 UBE3DQ7Z6J8 389 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 PTRH1Q86Y79 214 aaKnown RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 SLC35F3Q8IY50 421 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 TRIML2Q8N7C3 387 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 C7orf57Q8NEG2 295 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 ADAMTS18Q8TE60 1221 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 VPS33AQ96AX1 596 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 PPCDCQ96CD2 204 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 SMIM10Q96HG1 83 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 TRAPPC9Q96Q05 1148 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 SERINC2Q96SA4 455 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 CDRT15Q96T59 188 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 PRRX2Q99811 253 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 DUSP26Q9BV47 211 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 NPLQ9BXD5 320 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 TRIM15Q9C019 465 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 LYRM4Q9HD34 91 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 NEUROD4Q9HD90 331 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 PRM3Q9NNZ6 103 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 LHX9Q9NQ69 397 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 SERHLQ9NQF3 203 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 MIEF1Q9NQG6 463 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 ACSS1Q9NUB1 689 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-209ENST00000428574 UCKL1Q9NWZ5 548 aa8.64□□□□□ -1.03
NR1I3-209ENST00000428574 LRIT1Q9P2V4 623 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms