RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 MPZL2O60487 215 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 OR7A10O76100 309 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 F8A1P23610 371 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 RORCP51449 518 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 MAD2L1Q13257 205 aaPredicted RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 CD276Q5ZPR3 534 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 FAM26EQ8N5C1 309 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 COPS5Q92905 334 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 KCTD12Q96CX2 325 aaKnown RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 DMRTB1Q96MA1 342 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 HTATIP2Q9BUP3 242 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 TRIM62Q9BVG3 475 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PIF1Q9H611 641 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 EMC3Q9P0I2 261 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 POFUT2Q9Y2G5 429 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 KLHL20Q9Y2M5 609 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ASB4Q9Y574 426 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 C22orf31O95567 290 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 TPOP07202 933 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PRPS2P11908 318 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ITPKAP23677 461 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 DCDC1P59894 354 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 RUNX1T1Q06455 604 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 BICRALQ6AI39 1079 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 GCNT7Q6ZNI0 430 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ARMCX2Q7L311 632 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 VTCN1Q7Z7D3 282 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 NLGN1Q8N2Q7 840 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ARRDC2Q8TBH0 407 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ELMO1Q92556 727 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PPP1R16BQ96T49 567 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 SLC6A17Q9H1V8 727 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ERVMER34-1Q9H9K5 563 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 SMURF1Q9HCE7 757 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ABCB9Q9NP78 766 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 TMPRSS4Q9NRS4 437 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ACSL5Q9ULC5 683 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 F5H423 210 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 PPEF2O14830 753 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 ADRA2AP08913 450 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 PRKACAP17612 351 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 EVI2BP34910 448 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 MMP12P39900 470 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 OSTNP61366 133 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.94□□□□□ -1.62
RIF1-203ENST00000428287 IRF5Q13568 498 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 SF3A2Q15428 464 aaKnown RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 DUSP6Q16828 381 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 SUSD1Q6UWL2 747 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 MRGPREQ86SM8 312 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 OR8H2Q8N162 312 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 CHST13Q8NET6 341 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 ULK4Q96C45 1275 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 KIF12Q96FN5 646 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 LCORQ96JN0 433 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 OR52E6Q96RD3 313 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 OSMRQ99650 979 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TMEM175Q9BSA9 504 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TMEM43Q9BTV4 400 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 SLC19A3Q9BZV2 496 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 HACL1Q9UJ83 578 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 OR6C65A6NJZ3 312 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 HHLA1C9JL84 531 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 ATP6V1G2-DDX39BF2Z307 99 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 YKT6O15498 198 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 GCM2O75603 506 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 PPM1BO75688 479 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 CPEP16870 476 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 FUT11Q495W5 492 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 RAET1GQ6H3X3 334 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 PHACTR4Q8IZ21 702 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 UXS1Q8NBZ7 420 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 CCM2Q9BSQ5 444 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 THSD1Q9NS62 852 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 UXTQ9UBK9 157 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 CBLCQ9ULV8 474 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 TMEM129A0AVI4 362 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 A8MV72 311 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 CLIC1O00299 241 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 OR7A17O14581 309 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 CFDP00746 253 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 SERPINA1P01009 418 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 SLC2A4P14672 509 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 YBEYP58557 167 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 RBBP4Q09028 425 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 PPIGQ13427 754 aaKnown RBP eCLIP4.94□□□□□ -1.621e-6■■□□□ 12.1
RIF1-203ENST00000428287 CAMK1Q14012 370 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 COL19A1Q14993 1142 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 PTCHD3Q3KNS1 767 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 B3GNTL1Q67FW5 361 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 TMEM91Q6ZNR0 172 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 OVCH2Q7RTZ1 564 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 MARC2Q969Z3 335 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 EMID1Q96A84 441 aaPredicted RBP4.94□□□□□ -1.62
RIF1-203ENST00000428287 NECTIN4Q96NY8 510 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 EMC7Q9NPA0 242 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 IMPAD1Q9NX62 359 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 PIM2Q9P1W9 311 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 PLSCR5A0PG75 271 aa4.94□□□□□ -1.62
RIF1-203ENST00000428287 OTCP00480 354 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms