RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ANKRD37Q7Z713 158 aa19.48■□□□□ 0.71
HSPG2-205ENST00000427897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.48■□□□□ 0.71
HSPG2-205ENST00000427897 CYP4X1Q8N118 509 aa19.48■□□□□ 0.71
HSPG2-205ENST00000427897 SUN3Q8TAQ9 357 aa19.48■□□□□ 0.71
HSPG2-205ENST00000427897 PTCD3Q96EY7 689 aaKnown RBP19.48■□□□□ 0.71
HSPG2-205ENST00000427897 LPAR4Q99677 370 aa19.48■□□□□ 0.71
HSPG2-205ENST00000427897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.48■□□□□ 0.71
HSPG2-205ENST00000427897 KLHL31Q9H511 634 aa19.48■□□□□ 0.71
HSPG2-205ENST00000427897 KCNK13Q9HB14 408 aa19.48■□□□□ 0.71
HSPG2-205ENST00000427897 SNX15Q9NRS6 342 aa19.48■□□□□ 0.71
HSPG2-205ENST00000427897 ASF1BQ9NVP2 202 aa19.48■□□□□ 0.71
HSPG2-205ENST00000427897 OPTCQ9UBM4 332 aa19.48■□□□□ 0.71
HSPG2-205ENST00000427897 TENM4Q6N022 2769 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 A0A1W2PQ72 361 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 MAGEB17A8MXT2 336 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 KERAO60938 352 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 ITGAMP11215 1152 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 GMPRP36959 345 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 SERPINB8P50452 374 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 EXT1Q16394 746 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 SFT2D3Q587I9 215 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 FHL5Q5TD97 284 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 LRRC70Q7Z2Q7 622 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 ISCA2Q86U28 154 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 CUZD1Q86UP6 607 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 PLPP5Q8NEB5 264 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 ARMC2Q8NEN0 867 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 OR1N1Q8NGS0 311 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 CREB3L4Q8TEY5 395 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 KCTD4Q8WVF5 259 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 GAL3ST3Q96A11 431 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 C19orf60Q96EN9 201 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 SEC16BQ96JE7 1060 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 IMMP1LQ96LU5 166 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 PTCHD1Q96NR3 888 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 EFCAB11Q9BUY7 163 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 VPS11Q9H270 941 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 CDC42EP4Q9H3Q1 356 aaKnown RBP19.47■□□□□ 0.71
HSPG2-205ENST00000427897 EHD1Q9H4M9 534 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 NT5DC2Q9H857 520 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 COPS7BQ9H9Q2 264 aaPredicted RBP19.47■□□□□ 0.71
HSPG2-205ENST00000427897 STMN3Q9NZ72 180 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 CSAG2Q9Y5P2 127 aa19.47■□□□□ 0.71
HSPG2-205ENST00000427897 A0A096LPK6 155 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 POC1B-GALNT4F8VUJ3 575 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 UBXN8O00124 270 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 PRMT3O60678 531 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 C2P06681 752 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 CELA2AP08217 269 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 GFAPP14136 432 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 ZNF33BQ06732 778 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 TGM3Q08188 693 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 DLG1Q12959 904 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 CHIT1Q13231 466 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 DOC2AQ14183 400 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 TRIM40Q6P9F5 258 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 PAPD4Q6PIY7 484 aaKnown RBP19.46■□□□□ 0.71
HSPG2-205ENST00000427897 FAM26EQ8N5C1 309 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 CATSPER1Q8NEC5 780 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 ACSS3Q9H6R3 686 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 PLA2G3Q9NZ20 509 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 ABI3Q9P2A4 366 aa19.46■□□□□ 0.71
HSPG2-205ENST00000427897 DOCK10Q96BY6 2186 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 A0A0G2JN53 185 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 K7EPI3 171 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 ERI3O43414 337 aaKnown RBP19.45■□□□□ 0.7
HSPG2-205ENST00000427897 CLEC3AO75596 197 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 MSH2P43246 934 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 UQCRFS1P47985 274 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 KCNC1P48547 511 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 EFNA3P52797 238 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 PLA2G16P53816 162 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 RHAGQ02094 409 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 ACAP2Q15057 778 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 B3GNTL1Q67FW5 361 aaPredicted RBP19.45■□□□□ 0.7
HSPG2-205ENST00000427897 PLAG1Q6DJT9 500 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 RELL1Q8IUW5 271 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 IFT20Q8IY31 132 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 SHISA5Q8N114 240 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 PRR7Q8TB68 274 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 PSMF1Q92530 271 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 UBE2E3Q969T4 207 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 ZNF354BQ96LW1 612 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 REXO4Q9GZR2 422 aaKnown RBP19.45■□□□□ 0.7
HSPG2-205ENST00000427897 LANCL2Q9NS86 450 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 IGSF5Q9NSI5 407 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 PCDHGA10Q9Y5H3 936 aa19.45■□□□□ 0.7
HSPG2-205ENST00000427897 LRIT2A6NDA9 550 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 TCP11X1B4DZS4 312 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 B3GALT2O43825 422 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 DNAJB6O75190 326 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 KRT38O76015 456 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 AGFG2O95081 481 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 SLU7O95391 586 aaKnown RBP19.44■□□□□ 0.7
HSPG2-205ENST00000427897 F10P00742 488 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 PCNAP12004 261 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 EPB42P16452 691 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 SERPINB9P50453 376 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 TAS2R50P59544 299 aa19.44■□□□□ 0.7
HSPG2-205ENST00000427897 IRF9Q00978 393 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms