RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-205	ENST00000427561	RBM20	Q5T481	1227 aa	Known RBP	12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	C3P1	Q6ZMU1	363 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	ZNF227	Q86WZ6	799 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	CHERP	Q8IWX8	916 aa	Known RBP	12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	RASGEF1C	Q8N431	466 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	OR56A3	Q8NH54	315 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	UTP15	Q8TED0	518 aa	Known RBP	12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	ATL1	Q8WXF7	558 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	OR4K3	Q96R72	315 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	DEFB126	Q9BYW3	111 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	PRDM9	Q9NQV7	894 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	PPT2	Q9UMR5	302 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	MED13L	Q71F56	2210 aa		12.81	□□□□□ -0.36
UBA1-205	ENST00000427561	KLRC4-KLRK1	H3BQV0	150 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	PSMD12	O00232	456 aa	Predicted RBP	12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	ADAM10	O14672	748 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	TFEC	O14948	347 aa	Predicted RBP	12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	AHSG	P02765	367 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	RNH1	P13489	461 aa	Known RBP	12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	GABRB3	P28472	473 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	PTGS2	P35354	604 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	SCTR	P47872	440 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	MEOX1	P50221	254 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	CDKN2D	P55273	166 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	KRTAP10-9	P60411	292 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	TLE4	Q04727	773 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	PDAP1	Q13442	181 aa	Known RBP	12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	CRYM	Q14894	314 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	CYP1B1	Q16678	543 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	SPANXN3	Q5MJ09	141 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	MEX3B	Q6ZN04	569 aa	Known RBP	12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	KIAA0408	Q6ZU52	694 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	FGD2	Q7Z6J4	655 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	PPIL6	Q8IXY8	311 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	ARMC10	Q8N2F6	343 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	ACBD4	Q8NC06	268 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	ARMC2	Q8NEN0	867 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	NFAM1	Q8NET5	270 aa	Predicted RBP	12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	TRPV3	Q8NET8	790 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	FAM57A	Q8TBR7	257 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	SLC5A11	Q8WWX8	675 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	FBXL8	Q96CD0	374 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	PBK	Q96KB5	322 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	MCCC2	Q9HCC0	563 aa		12.8	□□□□□ -0.36
UBA1-205	ENST00000427561	PHF3	Q92576	2039 aa	Known RBP	12.79	□□□□□ -0.36
UBA1-205	ENST00000427561		A0A1B0GTH9	108 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	TCRBV16S1A1N1	A0A5B0	115 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561		A8MUA0	341 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	FANCG	O15287	622 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	ZNF500	O60304	480 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	TTC4	O95801	387 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	GUCA1C	O95843	209 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	TPO	P07202	933 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	ENO2	P09104	434 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	MAOA	P21397	527 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	PTGER1	P34995	402 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	HNF4A	P41235	474 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	CLCN2	P51788	898 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	RAB8A	P61006	207 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	TMEM211	Q6ICI0	200 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	SULF2	Q8IWU5	870 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	C16orf52	Q8NHV5	167 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	GRK7	Q8WTQ7	553 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	NEIL2	Q969S2	332 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	MS4A14	Q96JA4	679 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	NAP1L3	Q99457	506 aa	Predicted RBP	12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	AIF1L	Q9BQI0	150 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	NAT9	Q9BTE0	207 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	SLC6A16	Q9GZN6	736 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	SPNS1	Q9H2V7	528 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	ZFAT	Q9P243	1243 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	DYRK1B	Q9Y463	629 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	EML6	Q6ZMW3	1958 aa		12.79	□□□□□ -0.36
UBA1-205	ENST00000427561	IGKV3D-11	A0A0A0MRZ8	115 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	PEX1	O43933	1283 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	SMIM10L1	P0DMW3	83 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	TFEB	P19484	476 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	RBBP5	Q15291	538 aa	Known RBP	12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	GALNT7	Q86SF2	657 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	CDH24	Q86UP0	819 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	CD163	Q86VB7	1156 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	THOC6	Q86W42	341 aa	Known RBP	12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	CNTN4	Q8IWV2	1026 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	CYP4Z2P	Q8N1L4	340 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	TMEM156	Q8N614	296 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	B3GNT7	Q8NFL0	401 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	ASB5	Q8WWX0	329 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	SMIM10	Q96HG1	83 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	TSNARE1	Q96NA8	513 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	RHBG	Q9H310	441 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	PELI2	Q9HAT8	420 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	NECTIN3	Q9NQS3	549 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	FBXW2	Q9UKT8	454 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	VWA7	Q9Y334	891 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	MMACHC	Q9Y4U1	282 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	F8	P00451	2351 aa		12.78	□□□□□ -0.36
UBA1-205	ENST00000427561	FBN2	P35556	2912 aa		12.77	□□□□□ -0.36
UBA1-205	ENST00000427561	TRBV11-1	A0A0K0K1C0	115 aa		12.77	□□□□□ -0.37
UBA1-205	ENST00000427561	HS6ST1	O60243	411 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms