RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 LRRC40Q9H9A6 602 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 NT5MQ9NPB1 228 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 PRSS16Q9NQE7 514 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 TXLNGQ9NUQ3 528 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 HIF1ANQ9NWT6 349 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 FAM153AQ9UHL3 310 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 HPCAL4Q9UM19 191 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 SLC8A2Q9UPR5 921 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 B3GNT3Q9Y2A9 372 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 AAR2Q9Y312 384 aaKnown RBP5.35□□□□□ -1.55
C9orf3-205ENST00000427193 UTP11Q9Y3A2 253 aaKnown RBP5.35□□□□□ -1.55
C9orf3-205ENST00000427193 TEX264Q9Y6I9 313 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 SPTBN1Q01082 2364 aaKnown RBP5.35□□□□□ -1.55
C9orf3-205ENST00000427193 NBPF19A0A087WUL8 3843 aa5.35□□□□□ -1.55
C9orf3-205ENST00000427193 KNL1Q8NG31 2342 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 EDDM13A0A1B0GTR0 161 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 TBC1D3BA6NDS4 549 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 NDC80O14777 642 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 EIF3HO15372 352 aaKnown RBP eCLIP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 PSMD3O43242 534 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 LDB2O43679 373 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 PGLSO95336 258 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 POP4O95707 220 aaKnown RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 EGFP01133 1207 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 VIPP01282 170 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 IGLV3-19P01714 112 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 APODP05090 189 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 APRTP07741 180 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 SERPINF2P08697 491 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 CD86P42081 329 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 CCNHP51946 323 aaPredicted RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 GEMP55040 296 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 PLTPP55058 493 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 RHOAP61586 193 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 SNRPD1P62314 119 aaKnown RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 KDSRQ06136 332 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 CDK18Q07002 472 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 OLIG2Q13516 323 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 KEAP1Q14145 624 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 ELAVL3Q14576 367 aaKnown RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 ZNF235Q14590 738 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 BRD3Q15059 726 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 PON2Q15165 354 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 SLC1A5Q15758 541 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 UAP1Q16222 522 aaPredicted RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 SPDYCQ5MJ68 293 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 EMBQ6PCB8 327 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 GSTA5Q7RTV2 222 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 IQCKQ8N0W5 287 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 TTC8Q8TAM2 541 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 DTX3LQ8TDB6 740 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 CSGALNACT1Q8TDX6 532 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 ELP5Q8TE02 316 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 PEX13Q92968 403 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 LRRC39Q96DD0 335 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 GDAP1L1Q96MZ0 367 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 RANBP9Q96S59 729 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 FERMT1Q9BQL6 677 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 ABHD14AQ9BUJ0 271 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 KIFC1Q9BW19 673 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 PCDHAC1Q9H158 963 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 RSPH9Q9H1X1 276 aaPredicted RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 DPH5Q9H2P9 285 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 MRM3Q9HC36 420 aaKnown RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 XAB2Q9HCS7 855 aaKnown RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 TREX1Q9NSU2 369 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 KLHL8Q9P2G9 620 aaPredicted RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 ASIC3Q9UHC3 531 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 RSPH14Q9UHP6 348 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 SARDHQ9UL12 918 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 NFU1Q9UMS0 254 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 STON1Q9Y6Q2 735 aa5.34□□□□□ -1.55
C9orf3-205ENST00000427193 V9GYY5 206 aaPredicted RBP5.34□□□□□ -1.55
C9orf3-205ENST00000427193 ATG2BQ96BY7 2078 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 USP9YO00507 2555 aaPredicted RBP5.33□□□□□ -1.56
C9orf3-205ENST00000427193 THADAQ6YHU6 1953 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 A0A0J9YYE9 177 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 ZCWPW2A0A1B0GU75 182 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 GAGE12JA6NER3 117 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 AGAP14A8MT82 685 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 ANKRD66B4E2M5 251 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 AVILO75366 819 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 NDST3O95803 873 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 IGSF6O95976 241 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 AGTP01019 485 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 TRBC1P01850 177 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 FGF1P05230 155 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 HLA-EP13747 358 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 TSHRP16473 764 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 GM2AP17900 193 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 HLA-DPA1P20036 260 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 DRD3P35462 400 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 ARCN1P48444 511 aaKnown RBP5.33□□□□□ -1.56
C9orf3-205ENST00000427193 NPY2RP49146 381 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 NUMBP49757 651 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 ENTPD1P49961 510 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 GPX6P59796 221 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 IRX4P78413 519 aa5.33□□□□□ -1.56
C9orf3-205ENST00000427193 GRSF1Q12849 480 aaKnown RBP eCLIP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms