RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 PCNAP12004 261 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 FBLP22087 321 aaKnown RBP17.76■□□□□ 0.43
MCF2L-214ENST00000423251 ARL1P40616 181 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-214ENST00000423251 NAGLUP54802 743 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 ASPHQ12797 758 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 SLC9A5Q14940 896 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 ADPRMQ3LIE5 342 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 TOR1AIP1Q5JTV8 583 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 C10orf62Q5T681 223 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-214ENST00000423251 C10orf107Q8IVU9 208 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 CCNYL1Q8N7R7 359 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 AMER3Q8N944 861 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 OR4F6Q8NGB9 312 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 HUS1BQ8NHY5 278 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 ZCCHC10Q8TBK6 192 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 CCT6BQ92526 530 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 MS4A6EQ96DS6 147 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 PKNOX2Q96KN3 472 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 ZNF382Q96SR6 550 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 ARHGAP9Q9BRR9 750 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 TRIM4Q9C037 500 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 KLHL31Q9H511 634 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 CLMPQ9H6B4 373 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 CLK4Q9HAZ1 481 aaKnown RBP17.76■□□□□ 0.43
MCF2L-214ENST00000423251 ZNF282Q9UDV7 671 aaPredicted RBP17.76■□□□□ 0.43
MCF2L-214ENST00000423251 NXT1Q9UKK6 140 aaKnown RBP17.76■□□□□ 0.43
MCF2L-214ENST00000423251 NAALAD2Q9Y3Q0 740 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 MAP4K5Q9Y4K4 846 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 MRPS18BQ9Y676 258 aaKnown RBP17.76■□□□□ 0.43
MCF2L-214ENST00000423251 BSNQ9UPA5 3926 aa17.76■□□□□ 0.43
MCF2L-214ENST00000423251 BOD1L1Q8NFC6 3051 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 IGLV3-12A0A075B6K2 115 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 KLHL18O94889 574 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 ZNF888P0CJ79 500 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-214ENST00000423251 IL1RNP18510 177 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 TSPAN8P19075 237 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 HNRNPH1P31943 449 aaKnown RBP17.75■□□□□ 0.43
MCF2L-214ENST00000423251 PKNOX1P55347 436 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 PHEXP78562 749 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 OCA2Q04671 838 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 LCP2Q13094 533 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 PCLAFQ15004 111 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 ZRSR2Q15696 482 aaKnown RBP17.75■□□□□ 0.43
MCF2L-214ENST00000423251 NKG7Q16617 165 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 TMEM35AQ53FP2 167 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 CFAP157Q5JU67 520 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 ADNP2Q6IQ32 1131 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 CHSY3Q70JA7 882 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 PRSS41Q7RTY9 318 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 PDSS2Q86YH6 399 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 SRFBP1Q8NEF9 429 aaKnown RBP17.75■□□□□ 0.43
MCF2L-214ENST00000423251 OR2Y1Q8NGV0 311 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 GAL3ST3Q96A11 431 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 ZBTB9Q96C00 473 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 CMTM7Q96FZ5 175 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 TGIF2Q9GZN2 237 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 REXO4Q9GZR2 422 aaKnown RBP17.75■□□□□ 0.43
MCF2L-214ENST00000423251 AICDAQ9GZX7 198 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 GSTO2Q9H4Y5 243 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 VIPAS39Q9H9C1 493 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 MKKSQ9NPJ1 570 aaPredicted RBP17.75■□□□□ 0.43
MCF2L-214ENST00000423251 ACSS2Q9NR19 701 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 TRPS1Q9UHF7 1281 aa17.75■□□□□ 0.43
MCF2L-214ENST00000423251 H3BQF6 201 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 SGK494L7N484 410 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 AGPSO00116 658 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 FOXE1O00358 373 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-214ENST00000423251 TM9SF1O15321 606 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 NKX2-8O15522 239 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 CNOT3O75175 753 aaKnown RBP17.74■□□□□ 0.43
MCF2L-214ENST00000423251 FAM87AP0C7U9 286 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 PTX3P26022 381 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-214ENST00000423251 ALDH3A1P30838 453 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 ETV4P43268 484 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 RAB8AP61006 207 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 RPS18P62269 152 aaKnown RBP17.74■□□□□ 0.43
MCF2L-214ENST00000423251 TGM3Q08188 693 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 SSPNQ14714 243 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 DEFB134Q4QY38 66 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 LETMD1Q6P1Q0 360 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 OR2L5Q8NG80 312 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 WDR20Q8TBZ3 569 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 STT3BQ8TCJ2 826 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 MS4A8Q9BY19 250 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 TRPC4Q9UBN4 977 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 CTSFQ9UBX1 484 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 ZNF225Q9UK10 706 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 PPT2Q9UMR5 302 aa17.74■□□□□ 0.43
MCF2L-214ENST00000423251 PTRH2Q9Y3E5 179 aaKnown RBP17.74■□□□□ 0.43
MCF2L-214ENST00000423251 HEMK1Q9Y5R4 338 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-214ENST00000423251 A0A088AWK7 358 aa17.73■□□□□ 0.43
MCF2L-214ENST00000423251 A0A1B0GTL3 188 aa17.73■□□□□ 0.43
MCF2L-214ENST00000423251 ERI3O43414 337 aaKnown RBP17.73■□□□□ 0.43
MCF2L-214ENST00000423251 ZWINTO95229 277 aa17.73■□□□□ 0.43
MCF2L-214ENST00000423251 WISP1O95388 367 aa17.73■□□□□ 0.43
MCF2L-214ENST00000423251 TGFB1P01137 390 aa17.73■□□□□ 0.43
MCF2L-214ENST00000423251 ITGB2P05107 769 aa17.73■□□□□ 0.43
MCF2L-214ENST00000423251 ZGLP1P0C6A0 271 aa17.73■□□□□ 0.43
MCF2L-214ENST00000423251 ATXN8OSP0DMR3 200 aa17.73■□□□□ 0.43
MCF2L-214ENST00000423251 ZNF10P21506 573 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms