RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 EPG5Q9HCE0 2579 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 ZZEF1O43149 2961 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 A0A088AWK7 358 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 VSTM2BA6NLU5 285 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 PEX12O00623 359 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 CTIFO43310 598 aaKnown RBP14.92□□□□□ -0.02
BRAT1-202ENST00000421712 MLYCDO95822 493 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 HEXBP07686 556 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 CREB1P16220 341 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 ZNF10P21506 573 aaPredicted RBP14.92□□□□□ -0.02
BRAT1-202ENST00000421712 HNRNPH1P31943 449 aaKnown RBP14.92□□□□□ -0.02
BRAT1-202ENST00000421712 OLR1P78380 273 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 KLC1Q07866 573 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 IFT88Q13099 833 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 E2F2Q14209 437 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 TBR1Q16650 682 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 SGO1Q5FBB7 561 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 BORAQ6PGQ7 559 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 PDSS2Q86YH6 399 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 AFAP1L2Q8N4X5 818 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 TCP10LQ8TDR4 215 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 ZNF473Q8WTR7 871 aaKnown RBP14.92□□□□□ -0.02
BRAT1-202ENST00000421712 MS4A6EQ96DS6 147 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 CMTM7Q96FZ5 175 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 PEX11GQ96HA9 241 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 MAGEB10Q96LZ2 347 aaPredicted RBP14.92□□□□□ -0.02
BRAT1-202ENST00000421712 FAM111AQ96PZ2 611 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 CENPKQ9BS16 269 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 COPS7BQ9H9Q2 264 aaPredicted RBP14.92□□□□□ -0.02
BRAT1-202ENST00000421712 C14orf105Q9NVL8 296 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 C3orf18Q9UK00 162 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 ZFHX4Q86UP3 3567 aa14.92□□□□□ -0.02
BRAT1-202ENST00000421712 H0YIV9 168 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 PPP6CO00743 305 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 IGHEP01854 428 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 UMODP07911 640 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 SMIM10L1P0DMW3 83 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 PIK3CBP42338 1070 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 CCR10P46092 362 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 XCR1P46094 333 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 NEK2P51955 445 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 RAP1GDS1P52306 607 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 NAGLUP54802 743 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 EMP2P54851 167 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 ASPHQ12797 758 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 CASP8Q14790 479 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 MINDY4Q4G0A6 757 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 TMEM35AQ53FP2 167 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 FAAH2Q6GMR7 532 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 GPRIN3Q6ZVF9 776 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 LAPTM4BQ86VI4 370 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 C10orf107Q8IVU9 208 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 TMEM151BQ8IW70 566 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 RNF175Q8N4F7 328 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 SRFBP1Q8NEF9 429 aaKnown RBP14.91□□□□□ -0.02
BRAT1-202ENST00000421712 MYRIPQ8NFW9 859 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 OR2L5Q8NG80 312 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 OR5T3Q8NGG3 340 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 APOBEC4Q8WW27 367 aaKnown RBP14.91□□□□□ -0.02
BRAT1-202ENST00000421712 L3HYPDHQ96EM0 354 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 SMIM10Q96HG1 83 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 SPSB2Q99619 263 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 STMN4Q9H169 189 aaPredicted RBP14.91□□□□□ -0.02
BRAT1-202ENST00000421712 OR51B5Q9H339 312 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 ELOVL6Q9H5J4 265 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 KCNK9Q9NPC2 374 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 SEMA3GQ9NS98 782 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 OXSMQ9NWU1 459 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 SLC17A7Q9P2U7 560 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 MKL2Q9ULH7 1088 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 STK38LQ9Y2H1 464 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 PKD1L2Q7Z442 2459 aa14.91□□□□□ -0.02
BRAT1-202ENST00000421712 DSPP15924 2871 aaKnown RBP14.9□□□□□ -0.02
BRAT1-202ENST00000421712 IGLV3-12A0A075B6K2 115 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 ARGFXA6NJG6 315 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 MAGEB17A8MXT2 336 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 PSMD12O00232 456 aaPredicted RBP14.9□□□□□ -0.02
BRAT1-202ENST00000421712 SAP18O00422 153 aaKnown RBP14.9□□□□□ -0.02
BRAT1-202ENST00000421712 CHST10O43529 356 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 B3GALT2O43825 422 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 CRCPO75575 148 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 OR4F21O95013 312 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 BMP10O95393 424 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 ITGB2P05107 769 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 PTX3P26022 381 aaPredicted RBP14.9□□□□□ -0.02
BRAT1-202ENST00000421712 DNAJB13P59910 316 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 RPS13P62277 151 aaKnown RBP14.9□□□□□ -0.02
BRAT1-202ENST00000421712 TRAF3Q13114 568 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 AP5B1Q2VPB7 878 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 LIPMQ5VYY2 423 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 LETMD1Q6P1Q0 360 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 EXOC3L1Q86VI1 746 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 ZC3H7AQ8IWR0 971 aaKnown RBP14.9□□□□□ -0.02
BRAT1-202ENST00000421712 SREK1Q8WXA9 508 aaKnown RBP14.9□□□□□ -0.02
BRAT1-202ENST00000421712 VPS50Q96JG6 964 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 IP6K3Q96PC2 410 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 KCNC2Q96PR1 638 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 MS4A8Q9BY19 250 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 RBCK1Q9BYM8 510 aa14.9□□□□□ -0.02
BRAT1-202ENST00000421712 TGIF2Q9GZN2 237 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms