RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 ATOH8Q96SQ7 321 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 FAM129BQ96TA1 746 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 SPATA9Q9BWV2 254 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 TMEM245Q9H330 911 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 LTB4R2Q9NPC1 389 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 DNAJC11Q9NVH1 559 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 NDUFAF1Q9Y375 327 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 NLRC5Q86WI3 1866 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 KERAO60938 352 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 LEFTY1O75610 366 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 CA3P07451 260 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 MTHFD1P11586 935 aaKnown RBP13.99□□□□□ -0.17
CHRD-204ENST00000420973 GP2P55259 537 aaKnown RBP13.99□□□□□ -0.17
CHRD-204ENST00000420973 ST8SIA6P61647 398 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 GLYATQ6IB77 296 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 ANKRD46Q86W74 232 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 AMER2Q8N7J2 671 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 ZNF555Q8NEP9 628 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 PIH1D2Q8WWB5 315 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 KIAA1191Q96A73 305 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 SLC6A15Q9H2J7 730 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHRD-204ENST00000420973 SLAMF8Q9P0V8 285 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 MED16Q9Y2X0 877 aa13.99□□□□□ -0.17
CHRD-204ENST00000420973 RFXAPO00287 272 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 FFAR2O15552 330 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 WBP4O75554 376 aaKnown RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 WDR47O94967 919 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 RASAL1O95294 804 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 APOC1P02654 83 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 HMGCLP35914 325 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 HNF4AP41235 474 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 PPP1R8Q12972 351 aaKnown RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 PLCZ1Q86YW0 608 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 RBFAQ8N0V3 343 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 OR4M1Q8NGD0 313 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 OR10Q1Q8NGQ4 319 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 ZBTB20Q9HC78 741 aaPredicted RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 NECTIN3Q9NQS3 549 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 SLC39A1Q9NY26 324 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 PCDHGA9Q9Y5G4 932 aaKnown RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 MYLKQ15746 1914 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 SEC22BO75396 215 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 BTF3P20290 206 aaKnown RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 PTGER3P43115 390 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 PREPP48147 710 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 METAP1P53582 386 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 AP1S1P61966 158 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 MESP2Q0VG99 397 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 GRIK2Q13002 908 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 RFTN1Q14699 578 aaPredicted RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 AP5B1Q2VPB7 878 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 FLYWCH1Q4VC44 716 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 ATP6AP1LQ52LC2 224 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 CRTC1Q6UUV9 634 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 DYNC2LI1Q8TCX1 351 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 KLK6Q92876 244 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 BCL2L14Q9BZR8 327 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 INTS10Q9NVR2 710 aaKnown RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 OPTCQ9UBM4 332 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 USP22Q9UPT9 525 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 PTPRDP23468 1912 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 TBC1D3BA6NDS4 549 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 CAPN5O15484 640 aaPredicted RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 SPAM1P38567 509 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 IL5RAQ01344 420 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 PTGR1Q14914 329 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 SGCAQ16586 387 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 KLHL12Q53G59 568 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 KLHL17Q6TDP4 642 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 STX12Q86Y82 276 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 LILRA3Q8N6C8 439 aaPredicted RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 OR4F6Q8NGB9 312 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 SLC9A6Q92581 669 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 TEX37Q96LM6 180 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 RNF145Q96MT1 663 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 GFM1Q96RP9 751 aaKnown RBP13.98□□□□□ -0.17
CHRD-204ENST00000420973 ZBP1Q9H171 429 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 TUBB1Q9H4B7 451 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 CACNA2D2Q9NY47 1150 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 VPS9D1Q9Y2B5 631 aa13.98□□□□□ -0.17
CHRD-204ENST00000420973 TCRBV3S1A0A5B6 114 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 TTLL8A6PVC2 850 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 HIST1H2AGP0C0S8 130 aaPredicted RBP13.97□□□□□ -0.17
CHRD-204ENST00000420973 HIST1H2ADP20671 130 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 YBX1P67809 324 aaKnown RBP13.97□□□□□ -0.17
CHRD-204ENST00000420973 FRG1Q14331 258 aaKnown RBP13.97□□□□□ -0.17
CHRD-204ENST00000420973 SF1Q15637 639 aaKnown RBP13.97□□□□□ -0.17
CHRD-204ENST00000420973 ZNF124Q15973 351 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 SYTL3Q4VX76 610 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 FNDC3BQ53EP0 1204 aaKnown RBP13.97□□□□□ -0.17
CHRD-204ENST00000420973 LETMD1Q6P1Q0 360 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 PNCKQ6P2M8 343 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 ANGPTL8Q6UXH0 198 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 SFTPA1Q8IWL2 248 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 OR4M2Q8NGB6 313 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 IRF7Q92985 503 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 HIST1H2AHQ96KK5 128 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 TSSK3Q96PN8 268 aa13.97□□□□□ -0.17
CHRD-204ENST00000420973 HIST1H2AJQ99878 128 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms