RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SIKE1Q9BRV8 207 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 BTBD10Q9BSF8 475 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 HGH1Q9BTY7 390 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 KIFC3Q9BVG8 833 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 TBC1D10AQ9BXI6 508 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 FRMD8P1Q9BZ68 369 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 OSBPL8Q9BZF1 889 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 RTN4RQ9BZR6 473 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 RAB6CQ9H0N0 254 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 THAP2Q9H0W7 228 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GOLPH3Q9H4A6 298 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 FAM96AQ9H5X1 160 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 TMEM206Q9H813 350 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 POLD4Q9HCU8 107 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 CHMP1AQ9HD42 196 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 TUFT1Q9NNX1 390 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GIMAP4Q9NUV9 329 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 CHCHD3Q9NX63 227 aaKnown RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 DDX43Q9NXZ2 648 aaKnown RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 EURLQ9NYK6 297 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 WSB2Q9NYS7 404 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 MRPL15Q9P015 296 aaKnown RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 STX18Q9P2W9 335 aaKnown RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 ATXN10Q9UBB4 475 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ASIC3Q9UHC3 531 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 KCNG2Q9UJ96 466 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ANAPC5Q9UJX4 755 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 RPS6KA6Q9UK32 745 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 DNAJC12Q9UKB3 198 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 PLAGL1Q9UM63 463 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ICAM5Q9UMF0 924 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 NIP7Q9Y221 180 aaKnown RBP eCLIP2.52□□□□□ -2.01
VPS41-206ENST00000418457 PTRH2Q9Y3E5 179 aaKnown RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 C2CD2Q9Y426 696 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ZHX2Q9Y6X8 837 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 TNS1Q9HBL0 1735 aaKnown RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 UMODL1Q5DID0 1318 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 IGSF9BQ9UPX0 1349 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 LOC100509620A0A075B734 347 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 IGKV6D-41A0A0C4DH26 115 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 EXOC1LA0A1B0GW35 172 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 LNP1A1A4G5 178 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 OR2M5A3KFT3 312 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 A8MUI8 341 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 A8MV72 311 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 KRTAP29-1A8MX34 341 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 DVL1O14640 695 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 CAPN9O14815 690 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 KLF11O14901 512 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 GYG2O15488 501 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 NDUFS4O43181 175 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 PSTPIP1O43586 416 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 XPNPEP2O43895 674 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 MAGEC1O60732 1142 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 ATP9AO75110 1047 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 ENTPD3O75355 529 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 AVILO75366 819 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 SPAG6O75602 509 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 PDE9AO76083 593 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 BMP10O95393 424 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 GCNT3O95395 438 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 PSMG1O95456 288 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 ACSL3O95573 720 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 KRT19P08727 400 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 CCDC166P0CW27 439 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 CPA3P15088 417 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 DESP17661 470 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 GM2AP17900 193 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 NMBRP28336 390 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 GTF2H1P32780 548 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 MAGEA8P43361 318 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 SLCO1A2P46721 670 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 ARCN1P48444 511 aaKnown RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 RAP1GDS1P52306 607 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 DVL1P1P54792 670 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 DLX5P56178 289 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 RPS8P62241 208 aaKnown RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 SNRPEP62304 92 aaKnown RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 PSMC6P62333 389 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 CXCL9Q07325 125 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 GAGE2BQ13066 116 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 RCN2Q14257 317 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 MESDQ14696 234 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 MORF4L2Q15014 288 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 RCN1Q15293 331 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 TMED2Q15363 201 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 SIX1Q15475 284 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 KYNUQ16719 465 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 KLHL38Q2WGJ6 581 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 DNAL1Q4LDG9 190 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 GAGE2EQ4V326 116 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 FAM98BQ52LJ0 330 aaKnown RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 TAF1BQ53T94 588 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 HSP90AA5PQ58FG0 334 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 IGSF11Q5DX21 431 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 FAM76BQ5HYJ3 339 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 SIRPB2Q5JXA9 342 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 HHATQ5VTY9 493 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 ZNF772Q68DY9 489 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 KRT39Q6A163 491 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms