RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 GSTA2P09210 222 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 COL8A1P27658 744 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 GSTM2P28161 218 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 CD96P40200 585 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 GDF5P43026 501 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 KCNK10P57789 538 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 TGFBIQ15582 683 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 ZRSR2Q15696 482 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 C18orf21Q32NC0 220 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 CDKL4Q5MAI5 379 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 TMIGD1Q6UXZ0 262 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 CTAGE6Q86UF2 777 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 FJX1Q86VR8 437 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 KRT78Q8N1N4 520 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 ARMC2Q8NEN0 867 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 ELP5Q8TE02 316 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 RELTQ969Z4 430 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 SEC16BQ96JE7 1060 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 FAR2Q96K12 515 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 NPAS2Q99743 824 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 PITHD1Q9GZP4 211 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 NT5DC2Q9H857 520 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 PRDM9Q9NQV7 894 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 GPRC5BQ9NZH0 403 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 SEC14L3Q9UDX4 400 aa16.51■□□□□ 0.23
PDLIM2-208ENST00000416159 NOTCH2Q04721 2471 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 NCF1BA6NI72 391 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 GABRR3A8MPY1 467 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 NCF1CA8MVU1 366 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 CXorf49A8MYA2 514 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 RAD51CO43502 376 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 PIAS1O75925 651 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 NCF1P14598 390 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 CD46P15529 392 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 MST1P26927 711 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 DCTP40126 519 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 GP5P40197 560 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 ATP6V0D1P61421 351 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 BTG2P78543 158 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 OR1C1Q15619 314 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 C3orf62Q6ZUJ4 267 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 RPS19BP1Q86WX3 136 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 GPSM1Q86YR5 675 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 CYP4X1Q8N118 509 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 CA13Q8N1Q1 262 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 HORMAD2Q8N7B1 307 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 MDS2Q8NDY4 140 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 GAL3ST3Q96A11 431 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 GPR22Q99680 433 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 RBBP8Q99708 897 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 NPLQ9BXD5 320 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 RHBGQ9H310 441 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 CDCP1Q9H5V8 836 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 CNOT10Q9H9A5 744 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 CAB39LQ9H9S4 337 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 WWOXQ9NZC7 414 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 COPG2Q9UBF2 871 aa16.5■□□□□ 0.23
PDLIM2-208ENST00000416159 TCRBV9S1A1TA0A576 114 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 FAM159BA6NKW6 160 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 CLGNO14967 610 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 TAPBPO15533 448 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 UTP20O75691 2785 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 UNC5CO95185 931 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 CCDC166P0CW27 439 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 STMN1P16949 149 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 GGT5P36269 586 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 BTN3A2P78410 334 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 OC90Q02509 493 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 RBPJQ06330 500 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 SLBPQ14493 270 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 C1QL3Q5VWW1 255 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 ZNF787Q6DD87 383 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 SULT1C3Q6IMI6 304 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 TMEM178AQ8NBL3 297 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 CCT6BQ92526 530 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 SCMH1Q96GD3 660 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 SIGLEC12Q96PQ1 595 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 UNKQ9C0B0 810 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 PHACTR1Q9C0D0 580 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 AICDAQ9GZX7 198 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 EHD1Q9H4M9 534 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 DNAJC11Q9NVH1 559 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 GRHL1Q9NZI5 618 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 UTP11Q9Y3A2 253 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 MMACHCQ9Y4U1 282 aa16.49■□□□□ 0.23
PDLIM2-208ENST00000416159 CROCCQ5TZA2 2017 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 A0A088AWK7 358 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 IGKV3D-11A0A0A0MRZ8 115 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 TCRBV16S1A1N1A0A5B0 115 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 ANKDD1BA6NHY2 528 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 SAGE2PA6NJ88 616 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 C4orf51C9J302 202 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 FAM227AF5H4B4 570 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 PHGDHO43175 533 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 MAN1A2O60476 641 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 ZG16O60844 167 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 CLEC3AO75596 197 aa16.48■□□□□ 0.23
PDLIM2-208ENST00000416159 STK16O75716 305 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms