RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NCBP2P52298 156 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCN1B-202ENST00000415950 CDK6Q00534 326 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 TMED4Q7Z7H5 227 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 PIANPQ8IYJ0 282 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 CLECL1Q8IZS7 167 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 BOCQ9BWV1 1114 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ABCG2Q9UNQ0 655 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 TCRBV3S1A0A5B6 114 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ISPDA4D126 451 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 RPS3P23396 243 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCN1B-202ENST00000415950 KDELR2P33947 212 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 IGFALSP35858 605 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 CSKP41240 450 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 FNTBP49356 437 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF280AP59817 542 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-202ENST00000415950 SLC35F1Q5T1Q4 408 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 SUSD1Q6UWL2 747 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 LRRTM3Q86VH5 581 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF280BQ86YH2 543 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 GPR135Q8IZ08 494 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 NXPE1Q8N323 547 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 TTC9BQ8N6N2 239 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 SPERTQ8NA61 448 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ASB12Q8WXK4 309 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 EGLN2Q96KS0 407 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 DPEP2Q9H4A9 486 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ZBTB20Q9HC78 741 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ARMC1Q9NVT9 282 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 ACSL6Q9UKU0 697 aa12.47□□□□□ -0.41
SCN1B-202ENST00000415950 YARS2Q9Y2Z4 477 aaKnown RBP12.47□□□□□ -0.41
SCN1B-202ENST00000415950 SMCHD1A6NHR9 2005 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 OR2AT4A6NND4 320 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 CD2P06729 351 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 H1F0P07305 194 aaKnown RBP12.46□□□□□ -0.41
SCN1B-202ENST00000415950 PGAM2P15259 253 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 CRISP3P54108 245 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 DPY19L1Q2PZI1 675 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF627Q7L945 461 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 RANBP3LQ86VV4 465 aaPredicted RBP12.46□□□□□ -0.41
SCN1B-202ENST00000415950 CARM1Q86X55 608 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 OR13J1Q8NGT2 312 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 NPLOC4Q8TAT6 608 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 GRHL3Q8TE85 626 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 AUTS2Q8WXX7 1259 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCN1B-202ENST00000415950 FUBP1Q96AE4 644 aaKnown RBP12.46□□□□□ -0.41
SCN1B-202ENST00000415950 SLC2A13Q96QE2 648 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 FAM129BQ96TA1 746 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 PLEKHA1Q9HB21 404 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 MED11Q9P086 117 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 A0A1W2PRQ8 180 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 PRAMEF12O95522 483 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 C8GP07360 202 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 FHP07954 510 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 VAMP1P23763 118 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 IGFBP6P24592 240 aaPredicted RBP12.46□□□□□ -0.41
SCN1B-202ENST00000415950 MAGEA12P43365 314 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 MLLT1Q03111 559 aaPredicted RBP12.46□□□□□ -0.41
SCN1B-202ENST00000415950 CYBRD1Q53TN4 286 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 ANKRD34AQ69YU3 496 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 PLEKHG7Q6ZR37 379 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 TMEM151AQ8N4L1 468 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 TBC1D15Q8TC07 691 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 SCAMP4Q969E2 229 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 CNDP2Q96KP4 475 aaKnown RBP12.46□□□□□ -0.41
SCN1B-202ENST00000415950 FRMD6Q96NE9 622 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 IL12RB2Q99665 862 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 INPP5KQ9BT40 448 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 SMOC2Q9H3U7 446 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 CNOT11Q9UKZ1 510 aaKnown RBP12.46□□□□□ -0.41
SCN1B-202ENST00000415950 SPO11Q9Y5K1 396 aa12.46□□□□□ -0.41
SCN1B-202ENST00000415950 CACNA1SQ13698 1873 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 PHRF1Q9P1Y6 1649 aaKnown RBP12.46□□□□□ -0.42
SCN1B-202ENST00000415950 ELOA3DA6NLF2 546 aaPredicted RBP12.46□□□□□ -0.42
SCN1B-202ENST00000415950 PI15O43692 258 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 KIAA0513O60268 411 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 PAPSS2O95340 614 aaPredicted RBP12.46□□□□□ -0.42
SCN1B-202ENST00000415950 KCNE1P15382 129 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 MAGEA6P43360 314 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 DSTNP60981 165 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 ELOA3BQ3SY89 546 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 SLC36A3Q495N2 470 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 SCGB2B2Q4G0G5 96 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 RUNDC3AQ59EK9 446 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.46□□□□□ -0.42
SCN1B-202ENST00000415950 PRPF38BQ5VTL8 546 aaKnown RBP12.46□□□□□ -0.42
SCN1B-202ENST00000415950 TXNDC8Q6A555 127 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 SPATC1Q76KD6 591 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 TMC8Q8IU68 726 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 DBF4BQ8NFT6 615 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 ELOA3Q8NG57 546 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 ZC3H10Q96K80 434 aaKnown RBP12.46□□□□□ -0.42
SCN1B-202ENST00000415950 TSGA13Q96PP4 275 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 MGLLQ99685 303 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 SLC32A1Q9H598 525 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 TNFRSF10DQ9UBN6 386 aa12.46□□□□□ -0.42
SCN1B-202ENST00000415950 J3QLW9 94 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 PTGESO14684 152 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms