RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SLC9B1P1A6NJY1 282 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 BMP10O95393 424 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 MLYCDO95822 493 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 ST6GAL1P15907 406 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 NELFEP18615 380 aaKnown RBP13.89□□□□□ -0.19
SGCE-202ENST00000415788 CXCR2P25025 360 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 GRK3P35626 688 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 CCR8P51685 355 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 LSM12Q3MHD2 195 aaKnown RBP13.89□□□□□ -0.19
SGCE-202ENST00000415788 UNC50Q53HI1 259 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 TMTC4Q5T4D3 741 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 ZNF425Q6IV72 752 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 FIGLAQ6QHK4 219 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 GOLGA7Q7Z5G4 137 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 B3GNT8Q7Z7M8 397 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 AMIGO2Q86SJ2 522 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 TMPRSS11BQ86T26 416 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 GALNT4Q8N4A0 578 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 AGBL5Q8NDL9 886 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 EME1Q96AY2 570 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 RCN3Q96D15 328 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 DUS3LQ96G46 650 aaKnown RBP13.89□□□□□ -0.19
SGCE-202ENST00000415788 MAGEB10Q96LZ2 347 aaPredicted RBP13.89□□□□□ -0.19
SGCE-202ENST00000415788 PPM1MQ96MI6 270 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 CMKLR1Q99788 373 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 IPPKQ9H8X2 491 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 ZBTB26Q9HCK0 441 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 PDE7BQ9NP56 450 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 SLC6A20Q9NP91 592 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 SOHLH2Q9NX45 425 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 SUCOQ9UBS9 1254 aaKnown RBP13.89□□□□□ -0.19
SGCE-202ENST00000415788 PCDHGB4Q9UN71 923 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 FAF1Q9UNN5 650 aaPredicted RBP13.89□□□□□ -0.19
SGCE-202ENST00000415788 PCDHGB5Q9Y5G0 923 aa13.89□□□□□ -0.19
SGCE-202ENST00000415788 ZNF292O60281 2723 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 hCG_2014768A0A024R1R8 64 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 IGKV1-8A0A0C4DH67 115 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 LRRC14BA6NHZ5 514 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 TTC36A6NLP5 189 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 A8MU76 341 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 H3BNH8 94 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 UGDHO60701 494 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 CSO75390 466 aaKnown RBP13.88□□□□□ -0.19
SGCE-202ENST00000415788 C8BP07358 591 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 HNRNPCP07910 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
SGCE-202ENST00000415788 MSL3P1P0C860 447 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 CDH1P12830 882 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 PVRP15151 417 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 CSTF2P33240 577 aaKnown RBP eCLIP13.88□□□□□ -0.19
SGCE-202ENST00000415788 NAGLUP54802 743 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 MS4A2Q01362 244 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 CLCQ05315 142 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 EIF3IQ13347 325 aaKnown RBP13.88□□□□□ -0.19
SGCE-202ENST00000415788 ZC3H12BQ5HYM0 836 aaKnown RBP13.88□□□□□ -0.19
SGCE-202ENST00000415788 ATG9BQ674R7 924 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 NXPE4Q6UWF7 544 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 SLCO4C1Q6ZQN7 724 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 ADCK2Q7Z695 626 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 CARM1Q86X55 608 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 FAM20CQ8IXL6 584 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 D2HGDHQ8N465 521 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 TBC1D19Q8N5T2 526 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 ABTB1Q969K4 478 aaPredicted RBP13.88□□□□□ -0.19
SGCE-202ENST00000415788 ASB9Q96DX5 294 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 WDR34Q96EX3 536 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 LIN37Q96GY3 246 aaPredicted RBP13.88□□□□□ -0.19
SGCE-202ENST00000415788 TRMOQ9BU70 441 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 GATA5Q9BWX5 397 aaPredicted RBP13.88□□□□□ -0.19
SGCE-202ENST00000415788 PITHD1Q9GZP4 211 aaPredicted RBP13.88□□□□□ -0.19
SGCE-202ENST00000415788 CUEDC1Q9NWM3 386 aaPredicted RBP13.88□□□□□ -0.19
SGCE-202ENST00000415788 SH3GLB1Q9Y371 365 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 FRYLO94915 3013 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 PIEZO1Q92508 2521 aa13.88□□□□□ -0.19
SGCE-202ENST00000415788 SH3PXD2BA1X283 911 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 E7EQ34 232 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 H7BY64 318 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 OTCP00480 354 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 C1GALT1C1LP0DN25 315 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 JUPP14923 745 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 EPORP19235 508 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 MLLT3P42568 568 aaPredicted RBP13.87□□□□□ -0.19
SGCE-202ENST00000415788 YBX1P67809 324 aaKnown RBP13.87□□□□□ -0.19
SGCE-202ENST00000415788 IRF8Q02556 426 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 TRAP1Q12931 704 aaKnown RBP13.87□□□□□ -0.19
SGCE-202ENST00000415788 LAPTM5Q13571 262 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 E2F2Q14209 437 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 GK3PQ14409 553 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 FCRL6Q6DN72 434 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 PAQR7Q86WK9 346 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 CCNYL1Q8N7R7 359 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 OR4K1Q8NGD4 311 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 ATP6V1E2Q96A05 226 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 PRAP1Q96NZ9 151 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 AIF1LQ9BQI0 150 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 EFCAB11Q9BUY7 163 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 NTMT1Q9BV86 223 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 NOL11Q9H8H0 719 aaKnown RBP13.87□□□□□ -0.19
SGCE-202ENST00000415788 SH2B3Q9UQQ2 575 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 CFLARO15519 480 aa13.87□□□□□ -0.19
SGCE-202ENST00000415788 NPHS1O60500 1241 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms