RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 TRIM42Q8IWZ5 723 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 SPACA3Q8IXA5 215 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 ZCCHC7Q8N3Z6 543 aaKnown RBP11.3□□□□□ -0.6
ATG4B-207ENST00000415107 AMER3Q8N944 861 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 ADAMTS18Q8TE60 1221 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 CT55Q8WUE5 264 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 SELENOMQ8WWX9 145 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 MR1Q95460 341 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 KIAA1143Q96AT1 154 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-207ENST00000415107 QRFPRQ96P65 431 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 OR1F2PQ96R84 312 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 CCT7Q99832 543 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 ZNF717Q9BY31 904 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-207ENST00000415107 AKIRIN1Q9H9L7 192 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-207ENST00000415107 MKKSQ9NPJ1 570 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-207ENST00000415107 C14orf105Q9NVL8 296 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 SIRT5Q9NXA8 310 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 ADAM29Q9UKF5 820 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 CROTQ9UKG9 612 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-207ENST00000415107 MRPS2Q9Y399 296 aaKnown RBP11.3□□□□□ -0.6
ATG4B-207ENST00000415107 CELSR3Q9NYQ7 3312 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 LAMA5O15230 3695 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 DMXL2Q8TDJ6 3036 aa11.3□□□□□ -0.6
ATG4B-207ENST00000415107 ANKRD11Q6UB99 2663 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 A0A1W2PQ72 361 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 SYNDIG1LA6NDD5 238 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 MANBAO00462 879 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 ERI3O43414 337 aaKnown RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 SNNO75324 88 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 ULK1O75385 1050 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 KLF7O75840 302 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 ZNF888P0CJ79 500 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 PCNAP12004 261 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 IL1RNP18510 177 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 TSPAN8P19075 237 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 TCN2P20062 427 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 FBLP22087 321 aaKnown RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 ALAS2P22557 587 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 PRPH2P23942 346 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 PTPN4P29074 926 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 HMOX2P30519 316 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 ARRB2P32121 409 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 DLSTP36957 453 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 ARL1P40616 181 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 MTTPP55157 894 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 RPS13P62277 151 aaKnown RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 PPP2R2AP63151 447 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 SNRPNP63162 240 aaKnown RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 TGIF1Q15583 401 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 CHI3L2Q15782 390 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 NKG7Q16617 165 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 ARL13AQ5H913 290 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 TOR1AIP1Q5JTV8 583 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 ARHGAP40Q5TG30 622 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 HHATQ5VTY9 493 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 KANK2Q63ZY3 851 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 LRRC69Q6ZNQ3 347 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 TRIM46Q7Z4K8 759 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 UBE3DQ7Z6J8 389 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 CLYBLQ8N0X4 340 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 CDYL2Q8N8U2 506 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 OR2Y1Q8NGV0 311 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 METTL6Q8TCB7 284 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 C11orf24Q96F05 449 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 CCNL2Q96S94 520 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 SERINC2Q96SA4 455 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 MTERF1Q99551 399 aaKnown RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 SPSB2Q99619 263 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 MACROD1Q9BQ69 325 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 KLHL31Q9H511 634 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 GPN2Q9H9Y4 310 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 PRDM7Q9NQW5 492 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 NMRK1Q9NWW6 199 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 IFT80Q9P2H3 777 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 ZNF282Q9UDV7 671 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 RAXQ9Y2V3 346 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 NAALAD2Q9Y3Q0 740 aa11.29□□□□□ -0.6
ATG4B-207ENST00000415107 TPRP12270 2363 aaKnown RBP11.29□□□□□ -0.6
ATG4B-207ENST00000415107 URB1O60287 2271 aaKnown RBP11.28□□□□□ -0.6
ATG4B-207ENST00000415107 A0A0A6YYC8 382 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-207ENST00000415107 BLACEA4D250 179 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 I3L1I5 382 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-207ENST00000415107 PLPP1O14494 284 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 AZIN1O14977 448 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 KLK10O43240 276 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 ETHE1O95571 254 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 PDYNP01213 254 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 SERPIND1P05546 499 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 CHRNGP07510 517 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 LIFP15018 202 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 HIST1H1TP22492 207 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-207ENST00000415107 FOXA1P55317 472 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 ABCE1P61221 599 aaKnown RBP11.28□□□□□ -0.6
ATG4B-207ENST00000415107 RPS15P62841 145 aaKnown RBP11.28□□□□□ -0.6
ATG4B-207ENST00000415107 MC1RQ01726 317 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 DEFB134Q4QY38 66 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 C1orf189Q5VU69 101 aa11.28□□□□□ -0.6
ATG4B-207ENST00000415107 TTC19Q6DKK2 380 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-207ENST00000415107 LCN10Q6JVE6 187 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms