RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 FCHO2Q0JRZ9 810 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 KCTD19Q17RG1 926 aaPredicted RBP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 RBM44Q6ZP01 1051 aaKnown RBP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 GALNT5Q7Z7M9 940 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 ATCAYQ86WG3 371 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 CHST14Q8NCH0 376 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 DENND6BQ8NEG7 585 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 C1GALT1C1Q96EU7 318 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 MED31Q9Y3C7 131 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 DOCK1Q14185 1865 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 UBE2QL1A1L167 161 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 C9JVG2 144 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 CASKO14936 926 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 SEMA3DO95025 777 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 PEX2P28328 305 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 MAGEA8P43361 318 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 XKP51811 444 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 GPR107Q5VW38 600 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 ZC3H14Q6PJT7 736 aaKnown RBP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 RAB2BQ8WUD1 216 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 C15orf40Q8WUR7 153 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 MCOLN1Q9GZU1 580 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 LINC00597Q9H2U6 94 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 B3GAT2Q9NPZ5 323 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 CMTM6Q9NX76 183 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 HHLA1C9JL84 531 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 HPRP00739 348 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 PDYNP01213 254 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 BCHEP06276 602 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 XRCC1P18887 633 aaPredicted RBP11.52□□□□□ -0.56
PTPRF-205ENST00000414879 RYKP34925 604 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 RAB8AP61006 207 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 LRRC26Q2I0M4 334 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 BICRALQ6AI39 1079 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 OGFOD2Q6N063 350 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 BLOC1S3Q6QNY0 202 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 LIPIQ6XZB0 460 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 OR5L2Q8NGL0 311 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 OR52J3Q8NH60 311 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 SPPL3Q8TCT6 385 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 FCRL4Q96PJ5 515 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 APOOQ9BUR5 198 aa11.52□□□□□ -0.56
PTPRF-205ENST00000414879 GTPBP2Q9BX10 602 aaKnown RBP11.52□□□□□ -0.56
PTPRF-205ENST00000414879 CACNG3O60359 315 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 JUNP05412 331 aaKnown RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 ALDH3A2P51648 485 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 MEDAGQ5VYS4 303 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 TRIM74Q86UV6 250 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 OR52E4Q8NGH9 312 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 CD200R1Q8TD46 325 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 CANT1Q8WVQ1 401 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 BORCS5Q969J3 196 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 HS6ST2Q96MM7 605 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 UCK2Q9BZX2 261 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 HOXD1Q9GZZ0 328 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 EPHX3Q9H6B9 360 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 IGSF5Q9NSI5 407 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 TAS2R7Q9NYW3 318 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 TBX21Q9UL17 535 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 HCN4Q9Y3Q4 1203 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 SPO11Q9Y5K1 396 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 NPIPB15A6NHN6 443 aaPredicted RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 PRKAR1AP10644 381 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 DBTP11182 482 aaKnown RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 GP1BBP13224 206 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 ACVR2AP27037 513 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 HOXD9P28356 352 aaPredicted RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 BMP8BP34820 402 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 ADRA1AP35348 466 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 AGTR2P50052 363 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 ACY1Q03154 408 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 DENND5AQ6IQ26 1287 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 TMEM214Q6NUQ4 689 aaKnown RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 SUSD1Q6UWL2 747 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 BMP8AQ7Z5Y6 402 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 P2RY8Q86VZ1 359 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 MCFD2Q8NI22 146 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 DPH7Q9BTV6 452 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 DNMT3BQ9UBC3 853 aaKnown RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 PEX16Q9Y5Y5 336 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 MYH10P35580 1976 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 PPM1BO75688 479 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 C6orf47O95873 294 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 THEGLP0DJG4 465 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 SEMA3BQ13214 749 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 MRPL58Q14197 206 aaKnown RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 LRRC25Q8N386 305 aaPredicted RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 PHTF2Q8N3S3 785 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 BIRC7Q96CA5 298 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 COX4I2Q96KJ9 171 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 CLEC4MQ9H2X3 399 aaPredicted RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 KAT8Q9H7Z6 458 aaKnown RBP11.52□□□□□ -0.57
PTPRF-205ENST00000414879 OR6C2Q9NZP2 312 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 MAP10Q9P2G4 905 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 LHX3Q9UBR4 397 aa11.52□□□□□ -0.57
PTPRF-205ENST00000414879 OR6C74A6NCV1 312 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 LIN52Q52LA3 116 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 RAB6CQ53S08 254 aa11.51□□□□□ -0.57
PTPRF-205ENST00000414879 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.51□□□□□ -0.574e-6■□□□□ 10.3
PTPRF-205ENST00000414879 CSNK1A1LQ8N752 337 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms