RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 NCCRP1Q6ZVX7 275 aaPredicted RBP14.83□□□□□ -0.03
SHMT2-202ENST00000414700 SPRED1Q7Z699 444 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 CHCHD4Q8N4Q1 142 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 MRPL1Q9BYD6 325 aaKnown RBP14.83□□□□□ -0.03
SHMT2-202ENST00000414700 OR51B5Q9H339 312 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 PRM3Q9NNZ6 103 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 PARD6AQ9NPB6 346 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 DMRT3Q9NQL9 472 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 SEMA4GQ9NTN9 838 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 KLHL3Q9UH77 587 aa14.83□□□□□ -0.03
SHMT2-202ENST00000414700 SCN3AQ9NY46 2000 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 A0A0J9YY10 115 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 TNFSF14O43557 240 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 SH3BP5O60239 455 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 ATP6V1B1P15313 513 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 EPHA4P54764 986 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 DIO3P55073 304 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 MYBPC1Q00872 1141 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 IMPG1Q17R60 797 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 SLC5A12Q1EHB4 618 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 AP5B1Q2VPB7 878 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 PROX2Q3B8N5 592 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 ATP6AP1LQ52LC2 224 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 FBXO42Q6P3S6 717 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 DBX2Q6ZNG2 339 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 Q6ZNX1 250 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 PQLC1Q8N2U9 271 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 CATSPER1Q8NEC5 780 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 APIPQ96GX9 242 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 AHCYL2Q96HN2 611 aaKnown RBP14.83□□□□□ -0.04
SHMT2-202ENST00000414700 CCT7Q99832 543 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 SNX7Q9UNH6 387 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 AK5Q9Y6K8 562 aa14.83□□□□□ -0.04
SHMT2-202ENST00000414700 SAP18O00422 153 aaKnown RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 ZW10O43264 779 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 RGS14O43566 566 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 ZNF883P0CG24 379 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 CDH3P22223 829 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 CXCR2P25025 360 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 CD1CP29017 333 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 GPR3P46089 330 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 RPL38P63173 70 aaKnown RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 KIAA0040Q15053 153 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 CHSY3Q70JA7 882 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 TMPRSS9Q7Z410 1059 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 PATL1Q86TB9 770 aaKnown RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 TMEM126BQ8IUX1 230 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 ERI1Q8IV48 349 aaKnown RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 FNDC5Q8NAU1 212 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 BAHD1Q8TBE0 780 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 STON2Q8WXE9 905 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 SLC35B4Q969S0 331 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 CCDC124Q96CT7 223 aaKnown RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 REPS1Q96D71 796 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 HSPBAP1Q96EW2 488 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 PRRX2Q99811 253 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 FAM60AQ9NP50 221 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 CEPT1Q9Y6K0 416 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 TRBC2A0A5B9 178 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 ANKDD1BA6NHY2 528 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 SLC9B1P1A6NJY1 282 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 SLC28A1O00337 649 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 FAM58BPP0C7Q3 252 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 LBPP18428 481 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 CDH2P19022 906 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 DHRS4L2Q6PKH6 230 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 DGLUCYQ7Z3D6 616 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 FBXW8Q8N3Y1 598 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 UBE2E3Q969T4 207 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 CCDC3Q9BQI4 270 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 NUDT22Q9BRQ3 303 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 EDEM2Q9BV94 578 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 AICDAQ9GZX7 198 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 RHBGQ9H310 441 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 ZNF385DQ9H6B1 395 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 RIC8BQ9NVN3 520 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 VPS29Q9UBQ0 182 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 ATXN7L1Q9ULK2 861 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 FAF1Q9UNN5 650 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 COPG1Q9Y678 874 aaKnown RBP14.82□□□□□ -0.04
SHMT2-202ENST00000414700 AP4B1Q9Y6B7 739 aa14.82□□□□□ -0.04
SHMT2-202ENST00000414700 IGHV5-51A0A0C4DH38 117 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 A0A1W2PQM1 296 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 SERTM1A2A2V5 107 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 UBDO15205 165 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 SEC22BO75396 215 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 SERPIND1P05546 499 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 PORP16435 677 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-202ENST00000414700 GRK3P35626 688 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 PIK3CBP42338 1070 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 HSPA13P48723 471 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 ACADVLP49748 655 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 SNRPNP63162 240 aaKnown RBP14.81□□□□□ -0.04
SHMT2-202ENST00000414700 CSTF3Q12996 717 aaKnown RBP14.81□□□□□ -0.04
SHMT2-202ENST00000414700 FRMPD2BQ6IN97 320 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 VN1R4Q7Z5H5 301 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 POU5F2Q8N7G0 328 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 HIPK4Q8NE63 616 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 CREB3L4Q8TEY5 395 aa14.81□□□□□ -0.04
SHMT2-202ENST00000414700 ZUFSPQ96AP4 578 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms