RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 C4orf51C9J302 202 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 SLC16A5O15375 505 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 CEP104O60308 925 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 PRMT3O60678 531 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 B4GALT2O60909 372 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 HOXD4P09016 255 aaPredicted RBP11.35□□□□□ -0.59
LIMS2-210ENST00000413578 SMIM10L1P0DMW3 83 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 MAOAP21397 527 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 RFC3P40938 356 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 SCTRP47872 440 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 CCR8P51685 355 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 GPR143P51810 404 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 ART1P52961 327 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 SARNPP82979 210 aaKnown RBP11.35□□□□□ -0.59
LIMS2-210ENST00000413578 HYAL2Q12891 473 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 TERF2Q15554 542 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 TRIP13Q15645 432 aaPredicted RBP11.35□□□□□ -0.59
LIMS2-210ENST00000413578 CASC4Q6P4E1 433 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 ARHGAP11AQ6P4F7 1023 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 MCUQ8NE86 351 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 OR52N2Q8NGI0 321 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 UTP15Q8TED0 518 aaKnown RBP11.35□□□□□ -0.59
LIMS2-210ENST00000413578 SMIM10Q96HG1 83 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 SERPINB12Q96P63 405 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 SLC6A16Q9GZN6 736 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 AICDAQ9GZX7 198 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 CXXC4Q9H2H0 198 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 TP63Q9H3D4 680 aaPredicted RBP11.35□□□□□ -0.59
LIMS2-210ENST00000413578 XAB2Q9HCS7 855 aaKnown RBP11.35□□□□□ -0.59
LIMS2-210ENST00000413578 PRDM9Q9NQV7 894 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 DEPPQ9NTK1 212 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 SAMD15Q9P1V8 674 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 KCNN3Q9UGI6 736 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 ZFP69BQ9UJL9 534 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 GUCA1BQ9UMX6 200 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 ACANP16112 2415 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 FAM221AA4D161 298 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 FAM90A27PA6NNH2 459 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 KLRC4-KLRK1H3BQV0 150 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 FCHO1O14526 889 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 OR1F1O43749 312 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 DIAPH2O60879 1101 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 ZNF888P0CJ79 500 aaPredicted RBP11.34□□□□□ -0.59
LIMS2-210ENST00000413578 HOXB4P17483 251 aaPredicted RBP11.34□□□□□ -0.59
LIMS2-210ENST00000413578 GABRB3P28472 473 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 DNAJA1P31689 397 aaKnown RBP11.34□□□□□ -0.59
LIMS2-210ENST00000413578 TERF1P54274 439 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 SKP1P63208 163 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 GPS1Q13098 491 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 CATSPEREQ5SY80 951 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 DUPD1Q68J44 220 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 PAQR3Q6TCH7 311 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 ABHD13Q7L211 337 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 CYP4Z2PQ8N1L4 340 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 ANKRD53Q8N9V6 530 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 B3GNT7Q8NFL0 401 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 CALML6Q8TD86 181 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 MAIP1Q8WWC4 291 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 RND1Q92730 232 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 PYCR2Q96C36 320 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 SNF8Q96H20 258 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 SEC16BQ96JE7 1060 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 SIGLEC10Q96LC7 697 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 DEFB126Q9BYW3 111 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 C20orf96Q9NUD7 363 aaPredicted RBP11.34□□□□□ -0.59
LIMS2-210ENST00000413578 ZFATQ9P243 1243 aa11.34□□□□□ -0.59
LIMS2-210ENST00000413578 TRMT6Q9UJA5 497 aaKnown RBP11.34□□□□□ -0.59
LIMS2-210ENST00000413578 SCN3AQ9NY46 2000 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
LIMS2-210ENST00000413578 INTS1Q8N201 2190 aaKnown RBP11.33□□□□□ -0.6
LIMS2-210ENST00000413578 TMEM200CA6NKL6 621 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 KLK8O60259 260 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 PRKNO60260 465 aaPredicted RBP11.33□□□□□ -0.6
LIMS2-210ENST00000413578 ITGA10O75578 1167 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 RNH1P13489 461 aaKnown RBP11.33□□□□□ -0.6
LIMS2-210ENST00000413578 AHRP35869 848 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 VPS41P49754 854 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 RGS4P49798 205 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 CLCN2P51788 898 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 NUP107P57740 925 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 GPR85P60893 370 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 REEP5Q00765 189 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 RGS1Q08116 209 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 HSP90AA5PQ58FG0 334 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 UGT3A1Q6NUS8 523 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 TTC27Q6P3X3 843 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 CCDC71Q8IV32 467 aaPredicted RBP11.33□□□□□ -0.6
LIMS2-210ENST00000413578 SCUBE1Q8IWY4 988 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 CYP4X1Q8N118 509 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 C2CD4AQ8NCU7 369 aaPredicted RBP11.33□□□□□ -0.6
LIMS2-210ENST00000413578 NRGNQ92686 78 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 NEIL2Q969S2 332 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 ALKBH8Q96BT7 664 aaKnown RBP11.33□□□□□ -0.6
LIMS2-210ENST00000413578 NDNQ99608 321 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 FOXC2Q99958 501 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 FAM167BQ9BTA0 163 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 RBSNQ9H1K0 784 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 ZDHHC11Q9H8X9 412 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 KCNJ16Q9NPI9 418 aa11.33□□□□□ -0.6
LIMS2-210ENST00000413578 HOMER3Q9NSC5 361 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms