RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 DGKQP52824 942 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 AQP4P55087 323 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 TBPL1P62380 186 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 CDK3Q00526 305 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 DOC2AQ14183 400 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 TBR1Q16650 682 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 DPY19L1Q2PZI1 675 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 FAM174BQ3ZCQ3 159 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 MTX3Q5HYI7 312 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 RABL3Q5HYI8 236 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 CRTC3Q6UUV7 619 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 CYP2R1Q6VVX0 501 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 PLA2G15Q8NCC3 412 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 ICA1LQ8NDH6 482 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 DNAJB14Q8TBM8 379 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 IFI44Q8TCB0 444 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 GTF2H4Q92759 462 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 SLCO4A1Q96BD0 722 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 REPS1Q96D71 796 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 CCDC115Q96NT0 180 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 OR52A5Q9H2C5 316 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 EHD1Q9H4M9 534 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 CCM2LQ9NUG4 571 aaPredicted RBP16.4■□□□□ 0.22
PTPRC-206ENST00000413409 WDR70Q9NW82 654 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 GMPR2Q9P2T1 348 aaKnown RBP16.4■□□□□ 0.22
PTPRC-206ENST00000413409 MAGEL2Q9UJ55 1249 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 DLGAP4Q9Y2H0 992 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 PCDHGA11Q9Y5H2 935 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 KCNE2Q9Y6J6 123 aa16.4■□□□□ 0.22
PTPRC-206ENST00000413409 DHRS12A0PJE2 317 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 BLACEA4D250 179 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 ENO4A6NNW6 628 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 ZNF839A8K0R7 811 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 H0YJX3 145 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 PIAS2O75928 621 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 PCCBP05166 539 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 THEGLP0DJG4 465 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 UMPSP11172 480 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 UQCRBP14927 111 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 SDC1P18827 310 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 PSMA4P25789 261 aaKnown RBP16.39■□□□□ 0.21
PTPRC-206ENST00000413409 GRIA3P42263 894 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 FOXK1P85037 733 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 MAPKAPK3Q16644 382 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 WSCD2Q2TBF2 565 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 SPANXN4Q5MJ08 99 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.39■□□□□ 0.21
PTPRC-206ENST00000413409 LRRTM4Q86VH4 590 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 ZNF480Q8WV37 535 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 STARD8Q92502 1023 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 SH3GL1Q99961 368 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 EFCAB11Q9BUY7 163 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 TEX101Q9BY14 249 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 MAPRE3Q9UPY8 281 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 RUVBL1Q9Y265 456 aaKnown RBP16.39■□□□□ 0.21
PTPRC-206ENST00000413409 DYRK1BQ9Y463 629 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 PCDHB3Q9Y5E6 796 aa16.39■□□□□ 0.21
PTPRC-206ENST00000413409 A0A096LPI6 279 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 TRBV5-3A0A0A0MS03 114 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 IGLON5A6NGN9 336 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 ERN1O75460 977 aaKnown RBP16.38■□□□□ 0.21
PTPRC-206ENST00000413409 RPN2P04844 631 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 SFTPCP11686 197 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 FCGR1AP12314 374 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 CLCA4Q14CN2 919 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 LRIF1Q5T3J3 769 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 KIAA1161Q6NSJ0 714 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 SLCO4C1Q6ZQN7 724 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 AMZ2Q86W34 360 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 DCUN1D3Q8IWE4 304 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 RIMKLAQ8IXN7 391 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 LRRC56Q8IYG6 542 aaPredicted RBP16.38■□□□□ 0.21
PTPRC-206ENST00000413409 ADGRG5Q8IZF4 528 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 ARL14Q8N4G2 192 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 TNIP2Q8NFZ5 429 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 MTFMTQ96DP5 389 aaKnown RBP16.38■□□□□ 0.21
PTPRC-206ENST00000413409 KLHDC7BQ96G42 594 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 APIPQ96GX9 242 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 SLC25A18Q9H1K4 315 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 Q9H521 79 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 RMND5AQ9H871 391 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 NLGN3Q9NZ94 848 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 SLAMF8Q9P0V8 285 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 VPS29Q9UBQ0 182 aa16.38■□□□□ 0.21
PTPRC-206ENST00000413409 FBN2P35556 2912 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 TCRBV5S2A0A599 114 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 KMOO15229 486 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 HNRNPRO43390 633 aaKnown RBP16.37■□□□□ 0.21
PTPRC-206ENST00000413409 PCDH8O95206 1070 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 ERGP11308 486 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 PRPS1L1P21108 318 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 KELP23276 732 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 S100A3P33764 101 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 NEK2P51955 445 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 DMPKQ09013 629 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 MAP7Q14244 749 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 NFE2L1Q14494 772 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 LRRC36Q1X8D7 754 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 PAGE2BQ5JRK9 111 aa16.37■□□□□ 0.21
PTPRC-206ENST00000413409 ATG9BQ674R7 924 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms