RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 WWTR1Q9GZV5 400 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 TMEM245Q9H330 911 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 RNF186Q9NXI6 227 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 ACTR3BQ9P1U1 418 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 TRIM10Q9UDY6 481 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 FBXL4Q9UKA2 621 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 ETV7Q9Y603 341 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 A0A087WUV0 522 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 OVOL3O00110 214 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 KLF11O14901 512 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 TEX28O15482 410 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 SYT7O43581 403 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 LMX1BO60663 402 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 CYTIPO60759 359 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 SAP30O75446 220 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 STBD1O95210 358 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 CALCAP01258 141 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 FAM157CP0CG43 387 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 GHRP10912 638 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 KRT3P12035 628 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 SKILP12757 684 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 DESP17661 470 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 RPL35AP18077 110 aaKnown RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 STIP1P31948 543 aaKnown RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 HPDP32754 393 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 NSFP46459 744 aaKnown RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 PITPNBP48739 271 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 CAMLGP49069 296 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 TNFSF10P50591 281 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 CLCN4P51793 760 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 LINC01547P58512 204 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 GMFBP60983 142 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 SP3Q02447 781 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 CEACAM7Q14002 265 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 DUSP5Q16690 384 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 SLC35E4Q6ICL7 350 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 CD164L2Q6UWJ8 174 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 CEACAM20Q6UY09 585 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 C15orf52Q6ZUT6 534 aaKnown RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 KDM8Q8N371 416 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 TMEM99Q8N816 258 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 TMEM178AQ8NBL3 297 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 TRPV3Q8NET8 790 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 OR10V1Q8NGI7 309 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 BPIFA2Q96DR5 249 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 GIMAP5Q96F15 307 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF274Q96GC6 653 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 NKX3-1Q99801 234 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF577Q9BSK1 485 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZDHHC6Q9H6R6 413 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 ATP13A3Q9H7F0 1226 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 DCLRE1BQ9H816 532 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 PIGVQ9NUD9 493 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 INTS10Q9NVR2 710 aaKnown RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 EPHA6Q9UF33 1036 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 KCNN3Q9UGI6 736 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 ELF5Q9UKW6 265 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 DNPEPQ9ULA0 475 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 ERVK-19Q9WJR5 959 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 C2CD2Q9Y426 696 aa4.24□□□□□ -1.73
HMGB3P31-201ENST00000413333 SPATA31D1Q6ZQQ2 1576 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 FAM172BPA6NC97 362 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 SEC24AO95486 1093 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 TGFAP01135 160 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 GSTA2P09210 222 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 MMP10P09238 476 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 ODC1P11926 461 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 CTNNA2P26232 953 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 RPA1P27694 616 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 MARCKSP29966 332 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 MAP2K2P36507 400 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 OR1D5P58170 312 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 BTG1P62324 171 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 IRX4P78413 519 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 PHEXP78562 749 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 GAMTQ14353 236 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 KARSQ15046 597 aaKnown RBP4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 SPHARQ15513 63 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 CARTPTQ16568 116 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 STPG1Q5TH74 334 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 LYPLAL1Q5VWZ2 237 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 NEK5Q6P3R8 708 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZCCHC12Q6PEW1 402 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 DLEU7Q6UYE1 221 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 TRMT1LQ7Z2T5 733 aaKnown RBP4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 TAF8Q7Z7C8 310 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 ELMOD2Q8IZ81 293 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 MARVELD2Q8N4S9 558 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 SIDT2Q8NBJ9 832 aaKnown RBP4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 LEMD2Q8NC56 503 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 OR13C5Q8NGS8 318 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 ARHGAP45Q92619 1136 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 TMEM186Q96B77 213 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 SLCO4A1Q96BD0 722 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 MMP28Q9H239 520 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 C3orf14Q9HBI5 128 aa4.23□□□□□ -1.73
HMGB3P31-201ENST00000413333 SLC52A3Q9NQ40 469 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms