RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NPAS3Q8IXF0 933 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 ABHD16BQ9H3Z7 469 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 TRPM5Q9NZQ8 1165 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 ARPC4-TTLL3A0A0A6YYG9 625 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 WASHC1A8K0Z3 465 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 AOC2O75106 756 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 HTR1AP08908 422 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 OR4Q2P0C623 313 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 PRG2P13727 222 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 LHCGRP22888 699 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 CYP27C1Q4G0S4 372 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 XKR7Q5GH72 579 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 CNIH2Q6PI25 160 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 SERPINA11Q86U17 422 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 BPHLQ86WA6 291 aaPredicted RBP13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 NECTIN4Q96NY8 510 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 TMEM248Q9NWD8 314 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 CNOT2Q9NZN8 540 aaKnown RBP13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 MED11Q9P086 117 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 APOL3O95236 402 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 PDYNP01213 254 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 MAGEA2P43356 314 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 TMEM179BQ7Z7N9 219 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 PIP5K1AQ99755 562 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 GPRC5BQ9NZH0 403 aa13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 LSM7Q9UK45 103 aaKnown RBP13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 NDRG4Q9ULP0 352 aaKnown RBP13.41□□□□□ -0.26
CLTCL1-201ENST00000412649 TOXO94900 526 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 ATP5C1P36542 298 aaKnown RBP13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 BMPR1AP36894 532 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 VLDLRP98155 873 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 LARS2Q15031 903 aaKnown RBP13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 FAM219BQ5XKK7 198 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 PSAPL1Q6NUJ1 521 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 BEND7Q8N7W2 519 aaPredicted RBP13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 NT5C3BQ969T7 300 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 SCRN2Q96FV2 425 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 CPPED1Q9BRF8 314 aaPredicted RBP13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 CLMPQ9H6B4 373 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 BRD9Q9H8M2 597 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 FARSBQ9NSD9 589 aaKnown RBP13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 SCO2O43819 266 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 EFCAB14O75071 495 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 C1QBP02746 253 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 CYP17A1P05093 508 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 MTHFD2P13995 350 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 BUD31P41223 144 aaPredicted RBP13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 PITPNAQ00169 270 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 IFITM2Q01629 132 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 SF3A2Q15428 464 aaKnown RBP13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 ALFQ53S48 1182 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 CRB2Q5IJ48 1285 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 ZNF613Q6PF04 617 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 LRRC70Q7Z2Q7 622 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 DENND1CQ8IV53 801 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 CLDN19Q8N6F1 224 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 OR8J1Q8NGP2 316 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 NEIL3Q8TAT5 605 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 PCDHB11Q9Y5F2 797 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 PPP2R3BQ9Y5P8 575 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 TRIM64A6NGJ6 449 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 TPST2O60704 377 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 ENTPD6O75354 484 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 H1F0P07305 194 aaKnown RBP13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 ATP13A5Q4VNC0 1218 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 NXNL2Q5VZ03 156 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 NADSYN1Q6IA69 706 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 ASB12Q8WXK4 309 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 TMPRSS11EQ9UL52 423 aa13.4□□□□□ -0.26
CLTCL1-201ENST00000412649 SERPINA4P29622 427 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 MAN2A2P49641 1150 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 RRAS2P62070 204 aaPredicted RBP13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 SOX4Q06945 474 aaPredicted RBP13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 SEMA3BQ13214 749 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 TIGD5Q53EQ6 642 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 KLHL36Q8N4N3 616 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 OR9Q2Q8NGE9 314 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 OR6K2Q8NGY2 324 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 PIGUQ9H490 435 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 BEX1Q9HBH7 125 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 TAS2R16Q9NYV7 291 aa13.4□□□□□ -0.27
CLTCL1-201ENST00000412649 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 LOC102723532A0A0G2JNH3 316 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 GSAPA4D1B5 854 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 PRMT3O60678 531 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 CLDN11O75508 207 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 KRT33BQ14525 404 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 SLC14A2Q15849 920 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 MICAQ29983 383 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 ADNP2Q6IQ32 1131 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 GET4Q7L5D6 327 aaPredicted RBP13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 PIGKQ92643 395 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 CCSER2Q9H7U1 834 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 MGAT4BQ9UQ53 548 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 ADM5C9JUS6 153 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 ATP6V1G2-DDX39BF2Z307 99 aa13.39□□□□□ -0.27
CLTCL1-201ENST00000412649 H7C2Y5 167 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms