RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 INPP4BO15327 924 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 LRRTM2O43300 516 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 RHBDL1O75783 438 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 MT-ND2P03891 347 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 ATP5BP06576 529 aaKnown RBP0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 ASNSP08243 561 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 OR52Z1P0C646 297 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 GDF1P27539 372 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 SFTPDP35247 375 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 HOXD13P35453 343 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 GNB2P62879 340 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 CXCL6P80162 114 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 RALGDSQ12967 914 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 IL11RAQ14626 422 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 PTGISQ16647 500 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 C17orf58Q2M2W7 97 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 LRRC37A5PQ49AS3 106 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 PLEKHS1Q5SXH7 462 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 NEPROQ6NW34 567 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 ARMCX5Q6P1M9 558 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 ENTHD1Q8IYW4 607 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF525Q8N782 197 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 MCUQ8NE86 351 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 KIR2DL5BQ8NHK3 375 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF721Q8TF20 911 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 IL12RB2Q99665 862 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 BARD1Q99728 777 aaKnown RBP0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 HSD17B14Q9BPX1 270 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 NOL11Q9H8H0 719 aaKnown RBP0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 KCNK13Q9HB14 408 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 THYN1Q9P016 225 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 ADAM22Q9P0K1 906 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 ADD3Q9UEY8 706 aaKnown RBP0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 IL36AQ9UHA7 158 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 PCDHGB4Q9UN71 923 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 MRPL11Q9Y3B7 192 aaKnown RBP0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 CPQQ9Y646 472 aa0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF644Q9H582 1327 aaPredicted RBP0.86□□□□□ -2.27
RNU2-55P-201ENST00000411146 FBP2O00757 339 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TNFSF11O14788 317 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 SCO2O43819 266 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 PRAF2O60831 178 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TADA2AO75478 443 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 CELF2O95319 508 aaKnown RBP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ANGPTL1O95841 491 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ALOX5P09917 674 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 STAG3L1P0CL83 205 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 SAGP10523 405 aaPredicted RBP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ODC1P11926 461 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TCF4P15884 667 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 GPX3P22352 226 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 FCGR2BP31994 310 aaPredicted RBP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 FCGR2CP31995 323 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 MATR3P43243 847 aaKnown RBP eCLIP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF75DP51815 510 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 BACE1P56817 501 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ARF3P61204 181 aaPredicted RBP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ARF1P84077 181 aaKnown RBP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 PAX2Q02962 417 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 PTCH1Q13635 1447 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 CRMP1Q14194 572 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF542PQ5EBM4 170 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 MUC21Q5SSG8 566 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 NAA16Q6N069 864 aaPredicted RBP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TTC27Q6P3X3 843 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 Q7L0L9 218 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TRMT11Q7Z4G4 463 aaKnown RBP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 CAMKMTQ7Z624 323 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TEX26Q8N6G2 289 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF491Q8N8L2 437 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 APPL2Q8NEU8 664 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 VSIG2Q96IQ7 327 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TECTBQ96PL2 329 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 SIGLEC12Q96PQ1 595 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 GCNAQ96QF7 691 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF184Q99676 751 aaPredicted RBP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 MAK16Q9BXY0 300 aaKnown RBP0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 KLHL4Q9C0H6 718 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ANKZF1Q9H8Y5 726 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TBC1D7Q9P0N9 293 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF319Q9P2F9 582 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TXNDC16Q9P2K2 825 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 TBC1D29Q9UFV1 150 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 POLLQ9UGP5 575 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 KIAA1217Q5T5P2 1943 aa0.85□□□□□ -2.27
RNU2-55P-201ENST00000411146 KIF26AQ9ULI4 1882 aaPredicted RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 LTBP1Q14766 1721 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 hCG_1807616A0A1W2PRN6 198 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 EPOPA6NHQ4 379 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZFP92A6NM28 416 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF724A8MTY0 619 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ZNF487B1APH4 448 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 F5H0A9 414 aaPredicted RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 SLC33A1O00400 549 aaPredicted RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 ADAM20O43506 726 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 FRAT2O75474 233 aaPredicted RBP0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 PSMD10O75832 226 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 STAM2O75886 525 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 PGM3O95394 542 aa0.84□□□□□ -2.27
RNU2-55P-201ENST00000411146 CSH1P0DML2 217 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms