RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 UBE2E3Q969T4 207 aa29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 C8orf44Q96CB5 159 aa29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 PEX11GQ96HA9 241 aa29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 SLC25A23Q9BV35 468 aa29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 RBCK1Q9BYM8 510 aa29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 VN1R1Q9GZP7 353 aa29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 IPPKQ9H8X2 491 aa29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 ACTR8Q9H981 624 aa29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 PCTPQ9UKL6 214 aa29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 PCDHGA9Q9Y5G4 932 aaKnown RBP29.44■■■□□ 2.3
TRAF3IP1-203ENST00000409739 A8MT66 165 aa29.43■■■□□ 2.3
TRAF3IP1-203ENST00000409739 ERI3O43414 337 aaKnown RBP29.43■■■□□ 2.3
TRAF3IP1-203ENST00000409739 CDH16O75309 829 aa29.43■■■□□ 2.3
TRAF3IP1-203ENST00000409739 GSTA1P08263 222 aa29.43■■■□□ 2.3
TRAF3IP1-203ENST00000409739 ACPPP15309 386 aa29.43■■■□□ 2.3
TRAF3IP1-203ENST00000409739 FAAH2Q6GMR7 532 aa29.43■■■□□ 2.3
TRAF3IP1-203ENST00000409739 TCTN3Q6NUS6 607 aa29.43■■■□□ 2.3
TRAF3IP1-203ENST00000409739 ZNF473Q8WTR7 871 aaKnown RBP29.43■■■□□ 2.3
TRAF3IP1-203ENST00000409739 A0A0G2JN53 185 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 A6NL46 340 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 CHST10O43529 356 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 UGDHO60701 494 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 RPS17P08708 135 aaKnown RBP29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 PCNAP12004 261 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 KRT15P19012 456 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 MINDY4Q4G0A6 757 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 MFSD4BQ5TF39 518 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 LIPJQ5W064 366 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 SH2D5Q6ZV89 423 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 MYLK4Q86YV6 388 aaPredicted RBP29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 FDCSPQ8NFU4 85 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 OR7G3Q8NG95 312 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 VPS50Q96JG6 964 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 NSUN5Q96P11 429 aaKnown RBP29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 OR1F2PQ96R84 312 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 MS4A8Q9BY19 250 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 REXO4Q9GZR2 422 aaKnown RBP29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 MLXIPLQ9NP71 852 aa29.42■■■□□ 2.3
TRAF3IP1-203ENST00000409739 OR7A17O14581 309 aa29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 PDGFAP04085 211 aa29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 CYC1P08574 325 aa29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 HPDP32754 393 aaPredicted RBP29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 C19orf57Q0VDD7 668 aa29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 OR2L5Q8NG80 312 aa29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 NUDT9Q9BW91 350 aa29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 NOL11Q9H8H0 719 aaKnown RBP29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 CLK4Q9HAZ1 481 aaKnown RBP29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 ZBTB26Q9HCK0 441 aa29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 LANCL2Q9NS86 450 aa29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 RAB21Q9UL25 225 aa29.41■■■□□ 2.3
TRAF3IP1-203ENST00000409739 A0A1W2PQ72 361 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 PCDH17O14917 1159 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 COX6A1P12074 109 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 IL10P22301 178 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 SERPINB1P30740 379 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 DEKP35659 375 aaKnown RBP29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 BTN3A2P78410 334 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 EEF1A2Q05639 463 aaKnown RBP29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 AIMP2Q13155 320 aaKnown RBP29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 TMEM205Q6UW68 189 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 RPS27LQ71UM5 84 aaKnown RBP29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 GALNT16Q8N428 558 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 L3MBTL4Q8NA19 623 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 OR52B6Q8NGF0 335 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 C1QTNF3Q9BXJ4 246 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 ATP13A2Q9NQ11 1180 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 DCDC2Q9UHG0 476 aa29.4■■■□□ 2.3
TRAF3IP1-203ENST00000409739 LOC102723996A0A087X1L8 192 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 OR2W5A6NFC9 320 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 GLRA3O75311 464 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 CDC123O75794 336 aaPredicted RBP29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 HPP00738 406 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 FHP07954 510 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 C8orf89P0DMQ9 161 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 TAC1P20366 129 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 PGDP52209 483 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 PLA2G16P53816 162 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 RAPSNQ13702 412 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 TRIM40Q6P9F5 258 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 TBC1D20Q96BZ9 403 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 FAR2Q96K12 515 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 QRFPRQ96P65 431 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 F2RL3Q96RI0 385 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 GPR83Q9NYM4 423 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 EMCNQ9ULC0 261 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 RNF11Q9Y3C5 154 aa29.39■■■□□ 2.3
TRAF3IP1-203ENST00000409739 H0YIV9 168 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CCNG1P51959 295 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 SOX8P57073 446 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 TRAF3Q13114 568 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ABHD17CQ6PCB6 329 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ASB18Q6ZVZ8 466 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 PTRH1Q86Y79 214 aaKnown RBP29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CA13Q8N1Q1 262 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 RNF175Q8N4F7 328 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 MREGQ8N565 214 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 ZNF483Q8TF39 744 aaPredicted RBP29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 CDK15Q96Q40 435 aa29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 G3BP2Q9UN86 482 aaKnown RBP29.38■■■□□ 2.29
TRAF3IP1-203ENST00000409739 TSC22D4Q9Y3Q8 395 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms