RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CAPN13Q6MZZ7 669 aaPredicted RBP7.26□□□□□ -1.25
LSM5-202ENST00000409292 MICALCLQ6ZW33 695 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 UBE2R2Q712K3 238 aaPredicted RBP7.26□□□□□ -1.25
LSM5-202ENST00000409292 PLD3Q8IV08 490 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 SIAH3Q8IW03 269 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 REXO1L1PQ8IX06 675 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 DMRTC2Q8IXT2 367 aaPredicted RBP7.26□□□□□ -1.25
LSM5-202ENST00000409292 LMNTD2Q8IXW0 634 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 ALDH16A1Q8IZ83 802 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 CYP4Z2PQ8N1L4 340 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 CPSF7Q8N684 471 aaKnown RBP7.26□□□□□ -1.25
LSM5-202ENST00000409292 PPFIBP2Q8ND30 876 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 CALML6Q8TD86 181 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 LPGAT1Q92604 370 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 ALKBH8Q96BT7 664 aaKnown RBP7.26□□□□□ -1.25
LSM5-202ENST00000409292 FAM136AQ96C01 138 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 CCDC138Q96M89 665 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 PTCHD1Q96NR3 888 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 SLC30A3Q99726 388 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 TREX2Q9BQ50 279 aaPredicted RBP7.26□□□□□ -1.25
LSM5-202ENST00000409292 SARGQ9BW04 601 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 TREX1Q9NSU2 369 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 DNAJB12Q9NXW2 375 aaKnown RBP7.26□□□□□ -1.25
LSM5-202ENST00000409292 TNFRSF10DQ9UBN6 386 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 TFR2Q9UP52 801 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 RNF6Q9Y252 685 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 R3HDM2Q9Y2K5 976 aaKnown RBP7.26□□□□□ -1.25
LSM5-202ENST00000409292 NAALAD2Q9Y3Q0 740 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 MAD1L1Q9Y6D9 718 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 OTOGQ6ZRI0 2925 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 ABCA2Q9BZC7 2435 aa7.26□□□□□ -1.25
LSM5-202ENST00000409292 ITPR3Q14573 2671 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 A0A088AWK7 358 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 IGKV1-8A0A0C4DH67 115 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 GRID2IPA4D2P6 1211 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 P2RX6O15547 441 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 HS6ST1O60243 411 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 B4GALT2O60909 372 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 TUBB4AP04350 444 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 FOSL1P15407 271 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 ALOX12P18054 663 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 TFEBP19484 476 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 ZNF10P21506 573 aaPredicted RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 NMBRP28336 390 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 DNAJA1P31689 397 aaKnown RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 HPDP32754 393 aaPredicted RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 TRHRP34981 398 aaPredicted RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 PTGER1P34995 402 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 GRIA1P42261 906 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 CCR8P51685 355 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 DGKQP52824 942 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 MLF1P58340 268 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 YBX1P67809 324 aaKnown RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 TBX2Q13207 712 aaPredicted RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 SNX1Q13596 522 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 PWP1Q13610 501 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 GBX1Q14549 363 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 TYSND1Q2T9J0 566 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 KIAA0930Q6ICG6 404 aaPredicted RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 NEPROQ6NW34 567 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 GK5Q6ZS86 529 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 TAOK1Q7L7X3 1001 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 SLC22A16Q86VW1 577 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 TGIF2LYQ8IUE0 185 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 SULF2Q8IWU5 870 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 GPALPP1Q8IXQ4 340 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 MYO1HQ8N1T3 1032 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 PRELID2Q8N945 189 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 TC2NQ8N9U0 490 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 ELP5Q8TE02 316 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 ASB11Q8WXH4 323 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 ATG4AQ8WYN0 398 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 KCNJ9Q92806 393 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 RMND5BQ96G75 393 aaPredicted RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 HSH2DQ96JZ2 352 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 BIRC8Q96P09 236 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 KIFC1Q9BW19 673 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 POLDIP3Q9BY77 421 aaKnown RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 RBCK1Q9BYM8 510 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 EXO5Q9H790 373 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 TRIM45Q9H8W5 580 aaPredicted RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 HOMER3Q9NSC5 361 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 TRMT6Q9UJA5 497 aaKnown RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 FBXW2Q9UKT8 454 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 MRPS33Q9Y291 106 aaKnown RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 ASB1Q9Y576 335 aa7.25□□□□□ -1.25
LSM5-202ENST00000409292 INTS1Q8N201 2190 aaKnown RBP7.25□□□□□ -1.25
LSM5-202ENST00000409292 HIVEP1P15822 2718 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 ABCA4P78363 2273 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 FAM237BA0A1B0GVD1 139 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 KRT87PA6NCN2 255 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 NKX2-6A6NCS4 301 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 OR14I1A6ND48 311 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 SAGE2PA6NJ88 616 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 A8MVJ9 347 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 CLDN4O14493 209 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 NDUFS4O43181 175 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 OR1F1O43749 312 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 FTCDO95954 541 aa7.24□□□□□ -1.25
LSM5-202ENST00000409292 STATHP02808 62 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms