RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 UBTD2Q8WUN7 234 aa12.01□□□□□ -0.49
ATG9A-203ENST00000409033 SMPDL3AQ92484 453 aa12.01□□□□□ -0.49
ATG9A-203ENST00000409033 PROX1Q92786 737 aa12.01□□□□□ -0.49
ATG9A-203ENST00000409033 C1QTNF7Q9BXJ2 289 aa12.01□□□□□ -0.49
ATG9A-203ENST00000409033 DMTF1Q9Y222 760 aa12.01□□□□□ -0.49
ATG9A-203ENST00000409033 ENTPD4Q9Y227 616 aa12.01□□□□□ -0.49
ATG9A-203ENST00000409033 CCDC88CQ9P219 2028 aa12.01□□□□□ -0.49
ATG9A-203ENST00000409033 A0A1W2PPW3 197 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 KMOO15229 486 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 OR10H3O60404 316 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 TRMUO75648 421 aaKnown RBP12□□□□□ -0.49
ATG9A-203ENST00000409033 CCNDBP1O95273 360 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 FUT4P22083 530 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 CXCR2P25025 360 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 HTR1BP28222 390 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 PIGAP37287 484 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 OLR1P78380 273 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 CDK6Q00534 326 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 DPY19L1Q2PZI1 675 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 ZNF385BQ569K4 471 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 NHSL2Q5HYW2 709 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 BROXQ5VW32 411 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 PAGE2Q7Z2X7 111 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 PATL1Q86TB9 770 aaKnown RBP12□□□□□ -0.49
ATG9A-203ENST00000409033 TBC1D19Q8N5T2 526 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 KCT2Q8NC54 265 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 CLIP3Q96DZ5 547 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 COL21A1Q96P44 957 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 CCDC3Q9BQI4 270 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 SYNDIG1Q9H7V2 258 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 KCNK12Q9HB15 430 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 CD93Q9NPY3 652 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 OLAHQ9NV23 265 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 DKK3Q9UBP4 350 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 PIAS3Q9Y6X2 628 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 IGLV3-16A0A075B6K0 115 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 LOC100506127A0A0U1RQW1 187 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 AHCYL1O43865 530 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 CTSEP14091 401 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 HOXA9P31269 272 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 ZFP36L2P47974 494 aaKnown RBP12□□□□□ -0.49
ATG9A-203ENST00000409033 LASP1Q14847 261 aaKnown RBP12□□□□□ -0.49
ATG9A-203ENST00000409033 KIAA0040Q15053 153 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 ATG9BQ674R7 924 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 PARGQ86W56 976 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 CCDC116Q8IYX3 515 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 NAA50Q9GZZ1 169 aaKnown RBP12□□□□□ -0.49
ATG9A-203ENST00000409033 RHBDL2Q9NX52 303 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 SEC14L3Q9UDX4 400 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 WDR37Q9Y2I8 494 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 PCDHB11Q9Y5F2 797 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 SNX11Q9Y5W9 270 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 POM121BA6NF01 834 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 EPOPA6NHQ4 379 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 PDPK1O15530 556 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 NPPAP01160 153 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 VIPP01282 170 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 POLR2CP19387 275 aaPredicted RBP12□□□□□ -0.49
ATG9A-203ENST00000409033 CLK1P49759 484 aaKnown RBP12□□□□□ -0.49
ATG9A-203ENST00000409033 NCBP2P52298 156 aaKnown RBP eCLIP12□□□□□ -0.49
ATG9A-203ENST00000409033 SLC5A12Q1EHB4 618 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 NRSN1Q8IZ57 195 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 OR5K1Q8NHB7 308 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 SLC9A6Q92581 669 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 UBE2FQ969M7 185 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 COQ10AQ96MF6 247 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 VPS35Q96QK1 796 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 INSM2Q96T92 566 aaPredicted RBP12□□□□□ -0.49
ATG9A-203ENST00000409033 SLC6A16Q9GZN6 736 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 TMCC3Q9ULS5 477 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 CCL27Q9Y4X3 112 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 COMMD3-BMI1R4GMX3 469 aa12□□□□□ -0.49
ATG9A-203ENST00000409033 LOC100130705A0A1B0GUX0 176 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 A0A1B0GVG6 124 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 M0R3G1 203 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 DCDC1P59894 354 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 HPCAP84074 193 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 ROR2Q01974 943 aaKnown RBP11.99□□□□□ -0.49
ATG9A-203ENST00000409033 SMN1Q16637 294 aaKnown RBP11.99□□□□□ -0.49
ATG9A-203ENST00000409033 ZNF750Q32MQ0 723 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 ANKRD54Q6NXT1 300 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 HIPK1Q86Z02 1210 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 OR5D16Q8NGK9 328 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 OR2L2Q8NH16 312 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 CCL4L1Q8NHW4 92 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 FAM83CQ9BQN1 747 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 TPSD1Q9BZJ3 242 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 ZDHHC5Q9C0B5 715 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 SRMSQ9H3Y6 488 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 RAD21L1Q9H4I0 556 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 C11orf16Q9NQ32 467 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 GIMAP4Q9NUV9 329 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 GDE1Q9NZC3 331 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 ANGPT4Q9Y264 503 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 J3KTA2 159 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 LINC00271P0C7V0 271 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 PABPC4LP0CB38 370 aaKnown RBP11.99□□□□□ -0.49
ATG9A-203ENST00000409033 PTX3P26022 381 aaPredicted RBP11.99□□□□□ -0.49
ATG9A-203ENST00000409033 NTSP30990 170 aa11.99□□□□□ -0.49
ATG9A-203ENST00000409033 SLC19A1P41440 591 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms